Detailed information NTG0801937

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: RE424_RS08715
• Genome accession: NZ_CP134047
• Coordinates: 1757410..1758684 (+)
• Length: 424 a.a.
• NCBI ID: WP_000102740.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain 21SAU_AGRO3
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1752410..1763684

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RE424_RS08685	mnmA	1752612..1753730 (-)	1119	WP_000066097.1	tRNA 2-thiouridine(34) synthase MnmA	-
RE424_RS08690	-	1753731..1754873 (-)	1143	WP_000409167.1	cysteine desulfurase family protein	-
RE424_RS08695	-	1755185..1756198 (+)	1014	WP_000985872.1	LLM class flavin-dependent oxidoreductase	-
RE424_RS08700	-	1756435..1756581 (-)	147	WP_023914731.1	SAS049 family protein	-
RE424_RS08705	-	1756621..1756803 (-)	183	WP_000752909.1	CsbD family protein	-
RE424_RS08710	cymR	1756903..1757325 (-)	423	WP_000704122.1	cysteine metabolism transcriptional regulator CymR	-
RE424_RS08715	rarA	1757410..1758684 (+)	1275	WP_000102740.1	replication-associated recombination protein A	Machinery gene
RE424_RS08720	-	1758845..1759618 (-)	774	WP_000682646.1	ThiF family adenylyltransferase	-
RE424_RS08725	-	1759618..1759746 (-)	129	WP_001790559.1	hypothetical protein	-
RE424_RS08735	aspS	1760079..1761845 (-)	1767	WP_000044799.1	aspartate--tRNA ligase	-
RE424_RS08740	hisS	1761861..1763123 (-)	1263	WP_000590826.1	histidine--tRNA ligase	-

Sequence

Protein

• Length: 424 a.a.
• Molecular weight: 47264.84 Da
• Isoelectric Point: 8.3539

>NTDB_id=801937 RE424_RS08715 WP_000102740.1 1757410..1758684(+) (rarA) [Staphylococcus aureus strain 21SAU_AGRO3]
MSTEPLASRMRPKNIDEIISQQHLVGPRGIIRRMVDTKKLTSMIFYGPPGIGKTSIAKAISGSTQYKFRQLNAVTNTKKD
MQLVVEEAKMSGQVILLLDEIHRLDKAKQDFLLPHLENGKIVLIGATTSNPYHAINPAIRSRAQIFELYPLNDEDVRQAL
TRAIEDEENGLKTYQPKIDEDAMTYFSTQSQGDVRSALNALELAVLSADNDKDGYRHVTLQDAKDCLQKGAFVSDKDGDM
HYDVMSAFQKSIRGSDVNAALHYLARLIEAGDLPTIVRRLLVISYEDIGLASPNAGQRTLAAIESAERLGLPEARIPLSQ
AVIELCLSPKSNSAMSAIDSALSDIRNGHVGQIPNHLKDGHYQGAKDLGRSIGYKYPHQYVNGYVSQQYLPDKLKNKIYY
EPKTTSKSEQQLKEIYNNLLKQRP

Nucleotide

• Length: 1275 bp

>NTDB_id=801937 RE424_RS08715 WP_000102740.1 1757410..1758684(+) (rarA) [Staphylococcus aureus strain 21SAU_AGRO3]
GTGAGTACAGAACCATTAGCATCGAGAATGCGCCCAAAAAATATAGATGAAATCATTTCCCAACAACATTTAGTTGGACC
AAGAGGCATTATCAGAAGAATGGTTGATACAAAAAAATTAACTTCAATGATTTTTTATGGTCCACCTGGTATAGGCAAAA
CAAGTATTGCCAAAGCAATTTCGGGCAGTACGCAATATAAATTCAGACAATTGAATGCTGTAACTAACACTAAAAAAGAT
ATGCAACTTGTTGTTGAAGAAGCTAAAATGTCTGGTCAAGTTATCTTGTTATTAGATGAAATACATCGACTAGATAAAGC
TAAACAAGACTTTTTATTACCTCATTTAGAAAATGGCAAAATCGTCTTGATCGGTGCTACAACTTCAAATCCTTATCATG
CTATCAATCCAGCGATTCGTTCAAGAGCGCAAATTTTTGAGTTATATCCTTTAAATGATGAAGATGTGCGCCAAGCTTTA
ACTCGTGCAATAGAAGATGAAGAGAATGGTTTGAAAACATATCAACCCAAAATTGATGAAGATGCCATGACCTACTTTTC
TACACAAAGTCAAGGTGATGTTCGTAGTGCGTTAAATGCATTGGAATTAGCTGTATTAAGCGCAGATAATGACAAAGACG
GTTATCGACATGTTACATTGCAAGATGCTAAAGACTGTTTACAAAAAGGTGCATTTGTAAGTGATAAGGATGGTGACATG
CATTACGATGTTATGAGCGCTTTCCAAAAATCTATCCGTGGTAGCGACGTCAATGCCGCTTTACATTATTTAGCACGATT
AATTGAAGCTGGAGATTTACCTACAATAGTTCGACGATTACTTGTAATTAGCTATGAGGATATAGGCTTAGCCTCACCTA
ATGCTGGTCAGAGAACACTTGCTGCTATTGAATCAGCAGAACGTCTAGGTTTACCAGAAGCTAGAATTCCACTAAGCCAA
GCAGTAATCGAACTATGCTTATCACCTAAGTCAAATTCAGCAATGAGTGCCATTGATAGTGCATTGTCCGATATTAGAAA
CGGTCATGTGGGCCAAATTCCAAACCATTTAAAAGATGGACATTATCAAGGTGCTAAAGATCTAGGCCGATCTATTGGTT
ACAAATATCCACACCAATATGTTAATGGCTATGTTTCACAGCAATATTTACCTGATAAACTAAAAAACAAAATTTATTAC
GAACCAAAAACGACATCTAAAAGTGAACAACAACTCAAAGAAATATATAACAACTTACTTAAACAAAGGCCGTAA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (254-418)

• ATPase family associated with various cellular activities (AAA) (AAA) (43-145)

• AAA C-terminal domain (AAA_assoc_2) (175-253)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	69.286	99.057	0.686