Detailed information NTG0801201

Bioinformatically predicted

Overview

• Name: recQ
• Type: Machinery gene
• Locus tag: RHO05_RS24735
• Genome accession: NZ_CP133856
• Coordinates: 5105081..5106910 (+)
• Length: 609 a.a.
• NCBI ID: WP_024186454.1
• Uniprot ID: -
• Organism: Escherichia coli strain ES1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 5100081..5111910

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RHO05_RS24710 (RHO05_24710)	-	5100858..5101349 (-)	492	WP_001551977.1	DUF943 family protein	-
RHO05_RS24715 (RHO05_24715)	-	5101346..5102194 (-)	849	WP_001551979.1	YPO3983 family protein	-
RHO05_RS24720 (RHO05_24720)	rarD	5102505..5103395 (-)	891	WP_001564210.1	EamA family transporter RarD	-
RHO05_RS24725 (RHO05_24725)	yigI	5103447..5103914 (-)	468	WP_001277142.1	acyl-CoA thioesterase YigI	-
RHO05_RS24730 (RHO05_24730)	pldA	5104079..5104948 (+)	870	WP_001259693.1	phospholipase A	-
RHO05_RS24735 (RHO05_24735)	recQ	5105081..5106910 (+)	1830	WP_024186454.1	ATP-dependent DNA helicase RecQ	Machinery gene
RHO05_RS24740 (RHO05_24740)	rhtC	5106974..5107594 (+)	621	WP_000928844.1	threonine export protein RhtC	-
RHO05_RS24745 (RHO05_24745)	rhtB	5107656..5108276 (-)	621	WP_000171710.1	homoserine/homoserine lactone efflux protein	-
RHO05_RS24750 (RHO05_24750)	pldB	5108387..5109409 (+)	1023	WP_000487654.1	lysophospholipase L2	-
RHO05_RS24755 (RHO05_24755)	yigL	5109417..5110217 (+)	801	WP_000285352.1	sugar/pyridoxal phosphate phosphatase YigL	-
RHO05_RS24760 (RHO05_24760)	bioP	5110293..5111192 (+)	900	WP_001551984.1	biotin transporter	-

Sequence

Protein

• Length: 609 a.a.
• Molecular weight: 68377.53 Da
• Isoelectric Point: 7.2544

>NTDB_id=801201 RHO05_RS24735 WP_024186454.1 5105081..5106910(+) (recQ) [Escherichia coli strain ES1]
MAQAEVLNLESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTVVVSPLISLMKD
QVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQIRLLYIAPERLMLDNFLEHLAHWNPVLLAVDEAHCISQWGHDFRP
EYAALGQLRQRFPTLPFMALTATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGI
IYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESY
YQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNC
DICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVYGMGRDKSHEHWVSVIRQLIHLG
LVTQNIAQHSALQLTEAARPVLRGESSLQLAVPRIVALKPKAMQKSFGGNYDRKLFAKLRKLRKSIADESNVPPYVVFND
ATLIEMAEQMPITASEMLSVNGIGMRKLERFGKPFMALIRAHVDGDDEE

Nucleotide

• Length: 1830 bp

>NTDB_id=801201 RHO05_RS24735 WP_024186454.1 5105081..5106910(+) (recQ) [Escherichia coli strain ES1]
GTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGCTAAACAGGTTTTACAAGAAACCTTTGGCTACCAACAGTTTCG
CCCCGGCCAGGAAGAGATTATCGACACTGTGCTTTCCGGTCGCGATTGCCTGGTCGTCATGCCCACTGGTGGCGGAAAAT
CCCTTTGCTATCAAATTCCTGCTTTATTGCTAAACGGCCTTACCGTGGTTGTTTCACCGCTGATTTCGTTGATGAAAGAT
CAGGTGGATCAACTGCAAGCCAACGGCGTGGCGGCGGCGTGCCTTAACTCGACGCAAACCCGCGAGCAGCAACTTGAAGT
TATGACAGGCTGTCGCACCGGGCAAATCCGCCTGCTTTATATCGCGCCGGAACGCCTGATGCTGGATAACTTTCTTGAGC
ATCTGGCGCACTGGAATCCGGTGTTATTAGCCGTTGATGAAGCGCACTGTATCTCCCAATGGGGCCACGATTTCCGCCCG
GAATATGCCGCGCTCGGTCAGTTGCGCCAGCGGTTCCCGACGCTGCCGTTTATGGCGCTGACCGCCACAGCCGATGACAC
CACGCGCCAGGATATCGTGCGCCTGCTGGGGCTGAACGATCCGCTGATTCAAATCAGCAGTTTTGACCGTCCGAATATTC
GCTACATGCTGATGGAGAAATTCAAACCGCTCGATCAGTTGATGCGTTATGTACAGGAACAACGCGGTAAGTCGGGGATT
ATTTACTGTAATAGTCGTGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCA
TGCCGGGCTGGAAAATAATGTTCGCGCTGATGTGCAGGAGAAATTCCAGCGCGATGACCTGCAAATTGTGGTGGCGACGG
TGGCGTTCGGCATGGGCATCAATAAACCAAACGTTCGCTTCGTGGTGCATTTTGATATTCCGCGCAACATTGAATCCTAT
TATCAGGAAACCGGACGCGCCGGGCGTGATGGCCTGCCCGCGGAAGCGATGCTGTTTTACGATCCGGCGGATATGGCGTG
GCTGCGTCGTTGTCTGGAAGAGAAACCGCAGGGGCAGTTACAGGATATCGAACGTCATAAACTCAATGCGATGGGCGCGT
TTGCCGAAGCGCAAACCTGTCGCCGTCTGGTGCTGCTAAACTATTTTGGCGAAGGGCGGCAGGAGCCGTGCGGGAACTGC
GATATCTGCCTCGATCCGCCGAAACAATACGATGGTTCAACCGATGCTCAGATTGCCCTTTCCACCATTGGTCGTGTGAA
TCAGCGGTTTGGGATGGGTTATGTGGTGGAAGTGATTCGTGGCGCTAATAACCAGCGTATCCGCGACTATGGTCATGACA
AACTGAAAGTCTATGGCATGGGCCGTGATAAAAGCCATGAACATTGGGTGAGCGTGATCCGCCAGCTGATTCACCTCGGC
CTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCTGCGCGTCCGGTGCTGCGCGGCGAATCCTC
TTTGCAACTTGCCGTGCCACGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCCTTCGGCGGCAACTACGATCGCA
AACTGTTCGCCAAATTACGCAAACTGCGTAAATCGATTGCCGATGAAAGCAATGTCCCGCCGTACGTGGTGTTTAACGAC
GCGACCTTGATTGAGATGGCGGAACAGATGCCGATCACTGCCAGCGAAATGCTCAGCGTTAACGGCATTGGGATGCGCAA
GCTGGAACGCTTTGGCAAACCGTTTATGGCGCTGATTCGTGCGCATGTTGATGGCGATGACGAAGAGTAG

Domains

Predicted by InterProScan.

• DEAD/DEAH box helicase (DEAD) (28-187)

• HRDC domain (HRDC) (533-599)

• RecQ zinc-binding (RecQ_Zn_bind) (343-404)

• Helicase conserved C-terminal domain (Helicase_C) (223-330)

• RQC domain (RQC) (406-514)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recQ	Bacillus subtilis subsp. subtilis str. 168	40.034	97.209	0.389