Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   RDV59_RS10085 Genome accession   NZ_CP133476
Coordinates   2154952..2157300 (+) Length   782 a.a.
NCBI ID   WP_038676782.1    Uniprot ID   -
Organism   Streptococcus salivarius strain LMG 11489     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2149952..2162300
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RDV59_RS10070 (RDV59_10070) - 2150847..2151107 (-) 261 WP_002884687.1 hypothetical protein -
  RDV59_RS10075 (RDV59_10075) - 2151128..2151529 (-) 402 WP_038676777.1 DUF6608 family protein -
  RDV59_RS10080 (RDV59_10080) polA 2152083..2154722 (-) 2640 WP_038676779.1 DNA polymerase I -
  RDV59_RS10085 (RDV59_10085) mutS/mutS2 2154952..2157300 (+) 2349 WP_038676782.1 endonuclease MutS2 Machinery gene
  RDV59_RS10090 (RDV59_10090) - 2157402..2157944 (-) 543 WP_037602641.1 CvpA family protein -
  RDV59_RS10095 (RDV59_10095) zapA 2157941..2158255 (-) 315 WP_004183554.1 cell division protein ZapA -
  RDV59_RS10100 (RDV59_10100) rnhC 2158572..2159462 (+) 891 WP_038676784.1 ribonuclease HIII -
  RDV59_RS10105 (RDV59_10105) lepB 2159481..2160122 (+) 642 WP_002884233.1 signal peptidase I -

Sequence

Protein


Download         Length: 782 a.a.        Molecular weight: 87668.98 Da        Isoelectric Point: 6.4811

>NTDB_id=799746 RDV59_RS10085 WP_038676782.1 2154952..2157300(+) (mutS/mutS2) [Streptococcus salivarius strain LMG 11489]
MNTKILDQLEFNKVKDQFTEYLQTEQAQAELRDLVPMTNPERIQNQFTEIQEMAEIFVEHHGFAIGSLRDISEPLRRLEL
DADLNIQELIAIKKVLQASADLGRFYADLENVELVALKRLFEKIEAFPSLQGSLQSINDGGFIEHFASPELQNIRRQLKS
CDDAIRQTLQDILKKSGHMLAESLIASRNGRSVLPVKNTYRNRIAGVVHDISSSGNTVYIEPRAVIQLNEEITQLRADER
HEMARILHELSDQLRPQAAAIANNAWILGHMDFIRGKYLYLQDKKAVIPKISDNQTLQLLNVRHPLLINPVANDLRFDED
LTAIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILADKGSRVAIFQEIFADIGDEQSIEQSLSTFSSHMTHIVEILDAAD
NNSLVLVDELGAGTDPQEGASLAMAILEHLRLSQIKTMATTHYPELKAYGIETQHVENASMEFDTATLSPTYRFMQGVPG
RSNAFEIARRLGLNEIIVKEAENLTDTDSDVNRIIEQLEAQTVETQKRLEHIKDVEQENLKFNRAVKKLYNEFSHEYDKE
LEKAQKEIQEMVDTALAESDSILKNLHDKSQLKPHEVIDAKGKLKKLAPQVDLSKNKVLRKAKKEKAARAPRIGDDIIVT
AYGQRGTLTSQAKNGNWEAQVGLIKMTLKADEFTLVRAQAEAQQPKKKQINVVKKAKKSSGGPRARLDLRGKRYEEAMQE
LDAFIDQALLNNMSQVDIIHGIGTGVIRDAVTKYLRRHRHVKSFEYAPQSAGGSGCTIATLG

Nucleotide


Download         Length: 2349 bp        

>NTDB_id=799746 RDV59_RS10085 WP_038676782.1 2154952..2157300(+) (mutS/mutS2) [Streptococcus salivarius strain LMG 11489]
ATGAACACAAAGATTTTAGACCAATTAGAATTTAACAAGGTCAAGGACCAGTTCACAGAATACCTGCAGACTGAACAGGC
TCAGGCGGAGTTACGTGACTTGGTGCCTATGACCAATCCAGAAAGAATTCAAAATCAATTTACAGAAATTCAAGAAATGG
CTGAGATTTTCGTAGAGCACCATGGCTTTGCTATTGGTAGCCTGAGAGATATTTCTGAGCCCTTACGTCGCTTGGAACTG
GATGCTGATCTCAATATCCAGGAGCTCATTGCCATCAAGAAGGTGCTGCAAGCTTCGGCTGACCTTGGTCGCTTCTACGC
TGACCTTGAAAATGTTGAGCTCGTCGCTCTTAAACGTCTTTTCGAAAAGATCGAGGCCTTCCCAAGTCTACAAGGAAGCC
TTCAAAGTATCAATGATGGTGGTTTCATTGAGCATTTTGCTAGCCCTGAGTTACAAAATATCCGTCGTCAACTCAAATCT
TGCGATGATGCCATTCGCCAGACCTTGCAAGACATTCTCAAGAAATCTGGTCACATGTTGGCTGAGAGTTTGATTGCTAG
TCGTAATGGTCGTTCAGTGCTTCCTGTCAAAAATACCTACCGTAACCGTATTGCTGGGGTTGTGCATGACATCTCAAGCT
CTGGAAACACAGTGTATATCGAGCCACGCGCCGTTATCCAGCTTAACGAAGAAATTACACAATTACGTGCAGACGAACGC
CATGAGATGGCCCGCATCCTGCATGAACTGTCTGATCAACTCCGTCCACAAGCTGCTGCTATCGCCAACAACGCTTGGAT
TTTGGGCCACATGGACTTTATTCGTGGGAAATACCTCTATCTCCAGGATAAGAAGGCGGTTATTCCAAAGATTAGTGACA
ACCAAACACTCCAACTGCTTAACGTTCGTCACCCACTTTTGATCAATCCAGTAGCCAACGATTTGAGATTTGATGAGGAC
CTCACAGCCATTGTCATCACAGGTCCCAATACCGGTGGTAAAACGGTCATGCTTAAAACTCTAGGACTAGCACAACTGAT
GGCTCAATCTGGTCTTCCAATTTTGGCTGATAAGGGCAGTCGTGTGGCCATTTTCCAAGAGATTTTTGCGGACATCGGAG
ATGAACAGTCTATCGAACAGAGTTTGTCAACATTCTCTAGTCACATGACCCACATTGTCGAGATTTTGGATGCTGCCGAC
AACAACAGTCTTGTCTTGGTCGATGAGCTTGGGGCTGGTACTGACCCTCAGGAAGGGGCTAGTCTAGCCATGGCAATCCT
AGAGCACCTCCGTTTGAGTCAGATTAAGACCATGGCTACTACTCACTATCCTGAGCTTAAGGCCTATGGGATTGAGACGC
AACATGTGGAAAATGCTAGTATGGAGTTTGACACAGCAACTCTAAGCCCTACCTATCGTTTTATGCAGGGTGTCCCTGGT
CGCTCTAACGCCTTTGAAATCGCTCGTCGCCTCGGCTTGAATGAGATTATTGTCAAGGAAGCAGAAAACCTCACGGATAC
TGATAGTGATGTCAACCGTATCATCGAGCAACTTGAAGCCCAAACTGTGGAAACACAAAAACGTCTGGAGCACATCAAGG
ACGTTGAGCAAGAAAACCTTAAATTCAACCGTGCGGTCAAGAAACTCTATAATGAATTCTCCCATGAGTACGACAAGGAA
CTCGAAAAGGCTCAGAAAGAAATTCAAGAGATGGTGGATACAGCTTTGGCTGAGAGCGATAGTATTCTCAAAAATCTCCA
CGATAAGAGTCAACTCAAGCCTCATGAAGTTATCGACGCCAAAGGAAAACTCAAGAAACTTGCCCCTCAAGTGGACCTCT
CTAAGAATAAAGTCCTTCGTAAGGCCAAGAAAGAAAAGGCTGCGCGTGCCCCTCGTATCGGAGATGATATCATTGTTACC
GCCTATGGTCAACGTGGTACCCTTACCAGTCAAGCCAAAAATGGTAACTGGGAAGCCCAGGTAGGTCTCATCAAGATGAC
ACTCAAGGCGGATGAATTCACTCTTGTTCGTGCCCAAGCGGAAGCCCAACAACCTAAGAAGAAACAGATTAACGTGGTTA
AAAAAGCCAAAAAGTCATCTGGCGGTCCTCGTGCCCGTCTAGACCTTCGTGGGAAACGTTACGAAGAAGCCATGCAAGAG
CTTGATGCCTTTATTGACCAAGCCCTACTTAATAACATGAGTCAGGTGGACATCATCCACGGTATTGGTACAGGTGTCAT
CCGTGATGCTGTTACCAAATATCTCCGCCGTCATCGCCATGTTAAAAGTTTTGAATATGCCCCACAAAGTGCCGGTGGTT
CCGGATGTACCATTGCAACCTTAGGGTAA

Domains

Predicted by InterProScan.

MutS2 and Smr-associated SH3 domain (MSSS)

(633-672)

MutS domain V (MutS_V)

(324-505)

Smr domain (Smr)

(707-781)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

39.47

100

0.4