Detailed information NTG0799265

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: P1T45_RS10090
• Genome accession: NZ_CP119427
• Coordinates: 1900074..1901009 (-)
• Length: 311 a.a.
• NCBI ID: WP_003105521.1
• Uniprot ID: A0A2I8AI54
• Organism: Streptococcus parauberis strain KSP45
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1895074..1906009

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P1T45_RS10065 (P1T45_10070)	tsaD	1895705..1896718 (-)	1014	WP_003105067.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-
P1T45_RS10070 (P1T45_10075)	rimI	1896708..1897124 (-)	417	WP_003105855.1	ribosomal protein S18-alanine N-acetyltransferase	-
P1T45_RS10075 (P1T45_10080)	tsaB	1897129..1897821 (-)	693	WP_037620071.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
P1T45_RS10080 (P1T45_10085)	-	1898094..1898324 (+)	231	WP_003102975.1	DNA-dependent RNA polymerase subunit epsilon	-
P1T45_RS10085 (P1T45_10090)	-	1898326..1900008 (+)	1683	WP_003107714.1	ribonuclease J1	-
P1T45_RS10090 (P1T45_10095)	amiF	1900074..1901009 (-)	936	WP_003105521.1	ABC transporter ATP-binding protein	Regulator
P1T45_RS10095 (P1T45_10100)	oppD	1901009..1902052 (-)	1044	WP_003103717.1	ABC transporter ATP-binding protein	Regulator
P1T45_RS10100 (P1T45_10105)	-	1902067..1903098 (-)	1032	WP_004347296.1	ABC transporter permease	-
P1T45_RS10105 (P1T45_10110)	-	1903108..1904022 (-)	915	WP_004347295.1	ABC transporter permease	-
P1T45_RS10110 (P1T45_10115)	-	1904098..1905756 (-)	1659	WP_003107719.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 311 a.a.
• Molecular weight: 35205.16 Da
• Isoelectric Point: 6.5131

>NTDB_id=799265 P1T45_RS10090 WP_003105521.1 1900074..1901009(-) (amiF) [Streptococcus parauberis strain KSP45]
MTEERKKLVELKNVSLTFNKGKSNEVKAINNVSFDIYEGEVFGLVGESGSGKTTVGRAILKLYEITDGEIIFNGVNITKL
KGKELHNFRKDAQMIFQDPQASLNGRMKIRDIVAEGLDIHGLTKTKEEREARVQELLDRVGLNKDHVTRYPHEFSGGQRQ
RIGIARALAVKPKFIIADEPISALDVSIQAQVVNLMQKLQTERGLTYLFIAHDLSMVKYISDRIGVMHWGKMLEIGTSED
VYNNPIHPYTRSLLSAIPEPDPDYERQRVAEIYDPSIELDGKEREMREITPGHFVFSTEEEAVAYKANSNK

Nucleotide

• Length: 936 bp

>NTDB_id=799265 P1T45_RS10090 WP_003105521.1 1900074..1901009(-) (amiF) [Streptococcus parauberis strain KSP45]
ATGACTGAAGAACGTAAAAAATTAGTTGAACTAAAAAACGTTTCTTTAACCTTTAATAAAGGGAAAAGCAACGAAGTCAA
GGCCATTAATAATGTCAGTTTTGATATCTATGAAGGTGAAGTCTTTGGATTAGTTGGGGAATCAGGTTCTGGTAAAACAA
CAGTTGGCCGTGCTATCTTAAAACTTTATGAAATTACCGATGGCGAAATTATTTTCAATGGTGTAAATATCACTAAACTA
AAAGGAAAAGAACTTCATAATTTCCGTAAAGATGCACAAATGATTTTCCAAGATCCACAAGCAAGTCTTAATGGACGGAT
GAAAATTAGAGACATCGTTGCTGAAGGACTAGATATTCATGGTTTAACTAAAACAAAGGAAGAACGTGAAGCTCGTGTTC
AAGAACTACTTGACCGTGTTGGTTTGAATAAAGACCATGTGACTCGTTATCCACATGAATTTTCAGGAGGACAACGTCAA
CGTATTGGTATTGCCCGTGCCTTGGCTGTAAAACCCAAATTTATCATTGCTGATGAACCAATTTCTGCTTTGGACGTATC
TATCCAAGCACAGGTTGTTAACTTGATGCAAAAATTACAAACTGAACGTGGTTTAACCTACTTGTTTATCGCCCATGATT
TATCAATGGTTAAATACATTTCAGATCGTATTGGTGTTATGCACTGGGGTAAAATGTTAGAAATTGGGACATCTGAAGAT
GTTTATAATAACCCAATTCACCCATATACAAGAAGTCTCTTATCAGCTATTCCTGAACCAGACCCAGATTATGAACGCCA
ACGTGTTGCGGAAATTTATGATCCAAGTATTGAATTGGATGGAAAAGAACGTGAAATGCGTGAAATCACACCAGGTCACT
TCGTATTTTCAACAGAAGAAGAAGCAGTAGCTTACAAAGCAAATTCAAATAAATAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (30-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-265)

3D structure

• AlphaFold DB: A0A2I8AI54

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	54.221	99.035	0.537
amiF	Streptococcus thermophilus LMG 18311	53.896	99.035	0.534
amiF	Streptococcus salivarius strain HSISS4	53.247	99.035	0.527