Detailed information NTG0798903

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: Q7Q33_RS14075
• Genome accession: NZ_CP133412
• Coordinates: 2609991..2611256 (+)
• Length: 421 a.a.
• NCBI ID: WP_004398500.1
• Uniprot ID: O34528
• Organism: Bacillus subtilis strain KK001
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2604991..2616256

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q7Q33_RS14055 (Q7Q33_14055)	yrrB	2606362..2606982 (-)	621	WP_010886584.1	tetratricopeptide repeat protein	-
Q7Q33_RS14060 (Q7Q33_14060)	mnmA	2607068..2608183 (-)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
Q7Q33_RS14065 (Q7Q33_14065)	iscSA	2608214..2609353 (-)	1140	WP_003246057.1	cysteine desulfurase family protein	-
Q7Q33_RS14070 (Q7Q33_14070)	cymR	2609372..2609788 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
Q7Q33_RS14075 (Q7Q33_14075)	rarA	2609991..2611256 (+)	1266	WP_004398500.1	replication-associated recombination protein A	Machinery gene
Q7Q33_RS14080 (Q7Q33_14080)	tcdA	2611298..2612062 (-)	765	WP_009967893.1	ThiF family adenylyltransferase	-
Q7Q33_RS14090 (Q7Q33_14090)	aspS	2612398..2614176 (-)	1779	WP_003229758.1	aspartate--tRNA ligase	-
Q7Q33_RS14095 (Q7Q33_14095)	hisS	2614190..2615464 (-)	1275	WP_003229755.1	histidine--tRNA ligase	-
Q7Q33_RS14100 (Q7Q33_14100)	yrzK	2615846..2616016 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46514.38 Da
• Isoelectric Point: 7.2043

>NTDB_id=798903 Q7Q33_RS14075 WP_004398500.1 2609991..2611256(+) (rarA) [Bacillus subtilis strain KK001]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPELIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=798903 Q7Q33_RS14075 WP_004398500.1 2609991..2611256(+) (rarA) [Bacillus subtilis strain KK001]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGAATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGAACTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCAATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAGGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACTGGAAAGTTCGAATCTGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

3D structure

• AlphaFold DB: O34528

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	100	100	1