Detailed information NTG0798732

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: Q3101_RS05950
• Genome accession: NZ_CP133215
• Coordinates: 1271532..1272887 (-)
• Length: 451 a.a.
• NCBI ID: WP_308882863.1
• Uniprot ID: -
• Organism: Streptomyces sp. VNUA74
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1266532..1277887

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q3101_RS05930 (Q3101_05930)	-	1267431..1267775 (-)	345	WP_064726914.1	hypothetical protein	-
Q3101_RS05935 (Q3101_05935)	-	1267783..1268232 (-)	450	WP_079163446.1	DUF948 domain-containing protein	-
Q3101_RS05940 (Q3101_05940)	-	1268406..1270592 (+)	2187	WP_308882862.1	AAA family ATPase	-
Q3101_RS05945 (Q3101_05945)	rpsD	1270623..1271237 (-)	615	WP_007447552.1	30S ribosomal protein S4	-
Q3101_RS05950 (Q3101_05950)	rarA	1271532..1272887 (-)	1356	WP_308882863.1	replication-associated recombination protein A	Machinery gene
Q3101_RS05955 (Q3101_05955)	-	1272944..1273606 (-)	663	WP_064726918.1	vitamin K epoxide reductase family protein	-
Q3101_RS05960 (Q3101_05960)	hisS	1273808..1275070 (-)	1263	WP_064726919.1	histidine--tRNA ligase	-
Q3101_RS05965 (Q3101_05965)	-	1275084..1275791 (-)	708	WP_064726920.1	MBL fold metallo-hydrolase	-
Q3101_RS05970 (Q3101_05970)	-	1275975..1276799 (+)	825	WP_256031945.1	peptidylprolyl isomerase	-

Sequence

Protein

• Length: 451 a.a.
• Molecular weight: 48193.48 Da
• Isoelectric Point: 6.2008

>NTDB_id=798732 Q3101_RS05950 WP_308882863.1 1271532..1272887(-) (rarA) [Streptomyces sp. VNUA74]
MEPDLFTAAAEERQEKDPTGSPLAVRMRPRTLDEVVGQQHLLKPGSPLRRLVGEGGTGPAGPSSVILWGPPGTGKTTLAY
VVSKATNKRFVELSAITAGVKEVRAVIDGARRAVGGYGKETVLFLDEIHRFSKAQQDSLLPAVENRWVTLIAATTENPYF
SVISPLLSRSLLLTLEPLTDDDVRGLLRRALSDERGLGDAVTLPEDTEAHLLRIAGGDARRALTALEAAAGAALDKGEAE
VTLETLEETVDRAAVKYDRDGDQHYDVASALIKSIRGSDVDAALHYLARMIEAGEDPRFIARRLMISASEDIGLADPNAL
PVAVAAAQAVAMIGFPEAALTLSHATIALALAPKSNAATTAIGAALEDVRKGHAGPVPAHLRDSHYKGAGKLGHGQGYVY
PHDLPEGIATQQYAPDELKDRTYYTPTRHGAEARYADAVEWTRGHLGRKRS

Nucleotide

• Length: 1356 bp

>NTDB_id=798732 Q3101_RS05950 WP_308882863.1 1271532..1272887(-) (rarA) [Streptomyces sp. VNUA74]
GTGGAGCCCGACCTGTTCACCGCCGCAGCAGAAGAACGCCAGGAGAAGGACCCGACCGGCAGCCCCCTCGCCGTGCGGAT
GCGCCCGCGCACCCTCGACGAGGTCGTCGGCCAGCAGCACCTGCTCAAGCCCGGATCCCCCCTGCGTCGCCTGGTCGGCG
AGGGCGGCACGGGCCCCGCCGGTCCCTCCTCCGTCATCCTCTGGGGCCCGCCGGGCACCGGGAAGACCACCCTGGCGTAC
GTCGTCTCCAAGGCCACCAACAAGCGCTTCGTGGAGCTGTCCGCGATCACCGCGGGCGTCAAGGAGGTCCGCGCGGTCAT
CGACGGCGCCCGCCGCGCCGTCGGCGGGTACGGCAAGGAGACCGTCCTCTTCCTCGACGAGATCCACCGCTTCAGCAAGG
CCCAGCAGGACTCCCTGCTCCCGGCCGTCGAGAACCGCTGGGTGACCCTGATCGCCGCCACCACCGAGAACCCGTACTTC
TCGGTGATCTCCCCGCTGCTCTCCCGCTCCCTGCTGCTCACCCTCGAACCGCTCACCGACGACGACGTCCGCGGCCTGCT
CCGCCGCGCCCTGAGTGACGAGCGGGGCCTCGGGGACGCCGTGACCCTCCCCGAGGACACCGAGGCGCACCTGCTGCGCA
TCGCCGGCGGCGACGCCCGCCGCGCGCTCACCGCCCTGGAGGCCGCCGCCGGGGCCGCGCTCGACAAGGGCGAGGCCGAG
GTCACCCTGGAGACGCTGGAGGAGACCGTCGACCGGGCCGCCGTCAAGTACGACCGCGACGGCGACCAGCACTACGACGT
CGCCAGCGCCCTGATCAAGTCCATCCGCGGCTCCGACGTGGACGCCGCCCTGCACTACCTGGCCCGGATGATCGAGGCCG
GCGAGGACCCCCGCTTCATCGCCCGGCGCCTGATGATCTCCGCCAGCGAGGACATCGGCCTCGCCGACCCCAACGCGCTG
CCGGTCGCGGTGGCCGCCGCCCAGGCCGTCGCCATGATCGGCTTCCCCGAGGCCGCCCTCACCCTCAGCCACGCCACCAT
CGCCCTCGCCCTCGCCCCCAAGTCCAACGCCGCGACCACCGCCATCGGCGCCGCCCTGGAGGACGTGCGCAAGGGGCACG
CCGGCCCCGTCCCGGCCCACCTGCGGGACAGCCACTACAAGGGCGCCGGCAAGCTGGGCCACGGCCAGGGGTACGTGTAC
CCGCACGACCTGCCGGAGGGCATCGCCACCCAGCAGTACGCCCCGGACGAGCTGAAGGACCGGACGTACTACACCCCGAC
CCGGCACGGCGCCGAGGCCAGATACGCGGACGCCGTGGAGTGGACCCGCGGGCACCTCGGTCGCAAGCGGTCCTGA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (277-441)

• ATPase family associated with various cellular activities (AAA) (AAA) (65-169)

• AAA C-terminal domain (AAA_assoc_2) (200-276)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	44.573	96.009	0.428