Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | L6495_RS10135 | Genome accession | NZ_AP022903 |
| Coordinates | 1979918..1980205 (+) | Length | 95 a.a. |
| NCBI ID | WP_000648330.1 | Uniprot ID | A0AAE9P9A9 |
| Organism | Bacillus cereus strain MRY14-0079 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1974918..1985205
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L6495_RS10115 (BCM0079_1938) | - | 1976092..1976289 (+) | 198 | WP_062921548.1 | DUF4083 domain-containing protein | - |
| L6495_RS10120 (BCM0079_1939) | - | 1976321..1976782 (+) | 462 | WP_000035009.1 | NUDIX hydrolase | - |
| L6495_RS10125 (BCM0079_1940) | nadE | 1976831..1977649 (-) | 819 | WP_062921549.1 | ammonia-dependent NAD(+) synthetase | - |
| L6495_RS10130 (BCM0079_1941) | - | 1977921..1979801 (+) | 1881 | WP_236788246.1 | ABC transporter permease | - |
| L6495_RS10135 (BCM0079_1942) | abrB | 1979918..1980205 (+) | 288 | WP_000648330.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| L6495_RS10140 (BCM0079_1943) | - | 1980480..1981430 (+) | 951 | WP_001089035.1 | serine protease | - |
| L6495_RS10145 (BCM0079_1944) | - | 1981471..1981779 (-) | 309 | WP_001259894.1 | helix-turn-helix transcriptional regulator | - |
| L6495_RS10150 (BCM0079_1945) | - | 1981887..1982822 (+) | 936 | WP_062921551.1 | aldo/keto reductase | - |
| L6495_RS10155 (BCM0079_1946) | - | 1982871..1984046 (+) | 1176 | WP_062921552.1 | MFS transporter | - |
| L6495_RS10160 (BCM0079_1947) | - | 1984236..1984460 (-) | 225 | WP_000162606.1 | hypothetical protein | - |
| L6495_RS10165 (BCM0079_1948) | - | 1984545..1984892 (-) | 348 | WP_000426313.1 | DUF4257 domain-containing protein | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 10617.34 Da Isoelectric Point: 6.3179
>NTDB_id=79802 L6495_RS10135 WP_000648330.1 1979918..1980205(+) (abrB) [Bacillus cereus strain MRY14-0079]
MKATGVIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEEDKVILQKYQPYNACQITGDVSNQNISLANGNITVSIDGAK
YLIKEIEKFLNKSEA
MKATGVIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEEDKVILQKYQPYNACQITGDVSNQNISLANGNITVSIDGAK
YLIKEIEKFLNKSEA
Nucleotide
Download Length: 288 bp
>NTDB_id=79802 L6495_RS10135 WP_000648330.1 1979918..1980205(+) (abrB) [Bacillus cereus strain MRY14-0079]
ATGAAAGCAACAGGAGTTATTCGAAAAGTAGACGAATTAGGACGAATTGTTATTCCTAAAGAATTACGTGATGTATTGGG
AATACAAATCAAATCACCGCTTGAAATTTTCGTAGAAGAAGACAAAGTCATTTTACAAAAATATCAACCTTACAATGCTT
GTCAAATAACAGGTGATGTTTCAAATCAAAACATATCATTAGCAAATGGAAACATTACTGTTAGTATAGATGGAGCGAAA
TATTTAATAAAAGAAATAGAGAAGTTTTTAAACAAGAGTGAGGCTTAG
ATGAAAGCAACAGGAGTTATTCGAAAAGTAGACGAATTAGGACGAATTGTTATTCCTAAAGAATTACGTGATGTATTGGG
AATACAAATCAAATCACCGCTTGAAATTTTCGTAGAAGAAGACAAAGTCATTTTACAAAAATATCAACCTTACAATGCTT
GTCAAATAACAGGTGATGTTTCAAATCAAAACATATCATTAGCAAATGGAAACATTACTGTTAGTATAGATGGAGCGAAA
TATTTAATAAAAGAAATAGAGAAGTTTTTAAACAAGAGTGAGGCTTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
54.444 |
94.737 |
0.516 |