Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | PXV46_RS08405 | Genome accession | NZ_CP119113 |
| Coordinates | 1707478..1707777 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain GENOMIC22-002 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1702478..1712777
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PXV46_RS08380 (PXV46_08380) | gcvPA | 1703690..1705036 (-) | 1347 | WP_021285939.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| PXV46_RS08385 (PXV46_08385) | gcvT | 1705056..1706147 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| PXV46_RS08390 (PXV46_08390) | - | 1706306..1706830 (-) | 525 | WP_001015120.1 | shikimate kinase | - |
| PXV46_RS08395 (PXV46_08395) | - | 1706820..1706966 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| PXV46_RS08400 (PXV46_08400) | comGF | 1707063..1707560 (-) | 498 | WP_001825340.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| PXV46_RS08405 (PXV46_08405) | comGE | 1707478..1707777 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| PXV46_RS08410 (PXV46_08410) | comGD | 1707764..1708210 (-) | 447 | WP_001796473.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| PXV46_RS08415 (PXV46_08415) | comGC | 1708188..1708499 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| PXV46_RS08420 (PXV46_08420) | comGB | 1708513..1709583 (-) | 1071 | WP_000776425.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| PXV46_RS08425 (PXV46_08425) | comGA | 1709555..1710529 (-) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| PXV46_RS08430 (PXV46_08430) | - | 1710581..1711204 (-) | 624 | WP_021285938.1 | MBL fold metallo-hydrolase | - |
| PXV46_RS08435 (PXV46_08435) | - | 1711201..1711530 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| PXV46_RS08440 (PXV46_08440) | - | 1711530..1712516 (-) | 987 | WP_000161315.1 | ROK family glucokinase | - |
| PXV46_RS08445 (PXV46_08445) | - | 1712513..1712716 (-) | 204 | WP_000087559.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=797737 PXV46_RS08405 WP_000844413.1 1707478..1707777(-) (comGE) [Staphylococcus aureus strain GENOMIC22-002]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=797737 PXV46_RS08405 WP_000844413.1 1707478..1707777(-) (comGE) [Staphylococcus aureus strain GENOMIC22-002]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |