Detailed information
Bioinformatically predicted
Overview
| Name | luxS | Type | Regulator |
| Locus tag | OO788_RS17575 | Genome accession | NZ_AP026090 |
| Coordinates | 3469652..3470167 (-) | Length | 171 a.a. |
| NCBI ID | WP_001130215.1 | Uniprot ID | B5Z2A2 |
| Organism | Escherichia coli strain 26_141088 | ||
| Function | induction of competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3464652..3475167
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OO788_RS17550 (CL8NIID26_33600) | ygaZ | 3465051..3465788 (+) | 738 | WP_000445658.1 | L-valine exporter subunit YgaZ | - |
| OO788_RS17555 (CL8NIID26_33610) | ygaH | 3465778..3466113 (+) | 336 | WP_000119749.1 | L-valine transporter subunit YgaH | - |
| OO788_RS17560 (CL8NIID26_33620) | emrR | 3466204..3466734 (+) | 531 | WP_000378437.1 | multidrug efflux transporter EmrAB transcriptional repressor EmrR | - |
| OO788_RS17565 (CL8NIID26_33630) | emrA | 3466861..3468033 (+) | 1173 | WP_001302673.1 | multidrug efflux MFS transporter periplasmic adaptor subunit EmrA | - |
| OO788_RS17570 (CL8NIID26_33640) | emrB | 3468050..3469588 (+) | 1539 | WP_001295176.1 | multidrug efflux MFS transporter permease subunit EmrB | - |
| OO788_RS17575 (CL8NIID26_33650) | luxS | 3469652..3470167 (-) | 516 | WP_001130215.1 | S-ribosylhomocysteine lyase | Regulator |
| OO788_RS17580 (CL8NIID26_33660) | gshA | 3470317..3471873 (-) | 1557 | WP_000611787.1 | glutamate--cysteine ligase | - |
| OO788_RS17585 (CL8NIID26_33670) | yqaA | 3471946..3472374 (-) | 429 | WP_001287450.1 | YqaA family protein | - |
| OO788_RS17590 (CL8NIID26_33680) | yqaB | 3472371..3472937 (-) | 567 | WP_000273309.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| OO788_RS17620 (CL8NIID26_33690) | csrA | 3474165..3474350 (-) | 186 | WP_000906486.1 | carbon storage regulator CsrA | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 19444.24 Da Isoelectric Point: 5.0362
>NTDB_id=79710 OO788_RS17575 WP_001130215.1 3469652..3470167(-) (luxS) [Escherichia coli strain 26_141088]
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISP
MGCRTGFYMSLIGTPDEQRVADVWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELA
LPKEKLQELHI
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISP
MGCRTGFYMSLIGTPDEQRVADVWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELA
LPKEKLQELHI
Nucleotide
Download Length: 516 bp
>NTDB_id=79710 OO788_RS17575 WP_001130215.1 3469652..3470167(-) (luxS) [Escherichia coli strain 26_141088]
ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCGAAAACAATGAACAC
CCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCC
ATACCCTGGAGCACCTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGTGTAGAGATTATCGATATCTCGCCA
ATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTTGCTGATGTCTGGAAAGCGGC
AATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATTCCGGAGCTGAACGTCTACCAGTGTGGCACTTACCAGATGC
ACTCGTTGCAGGAAGCGCAGGATATTGCGCGTAGCATTCTGGAACGTGACGTGCGCATCAACAGCAACGAAGAACTGGCG
CTGCCGAAAGAGAAGTTGCAGGAACTGCACATTTAG
ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCGAAAACAATGAACAC
CCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCC
ATACCCTGGAGCACCTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGTGTAGAGATTATCGATATCTCGCCA
ATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTTGCTGATGTCTGGAAAGCGGC
AATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATTCCGGAGCTGAACGTCTACCAGTGTGGCACTTACCAGATGC
ACTCGTTGCAGGAAGCGCAGGATATTGCGCGTAGCATTCTGGAACGTGACGTGCGCATCAACAGCAACGAAGAACTGGCG
CTGCCGAAAGAGAAGTTGCAGGAACTGCACATTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxS | Vibrio cholerae strain A1552 |
72.515 |
100 |
0.725 |