Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   QMM33_RS04360 Genome accession   NZ_AP025940
Coordinates   854551..856299 (+) Length   582 a.a.
NCBI ID   WP_000828850.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain PZ900700204     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 849551..861299
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QMM33_RS04345 (PC0204_08480) thrB 850710..851579 (+) 870 WP_000692438.1 homoserine kinase -
  QMM33_RS04350 (PC0204_08490) msrB 851829..852767 (+) 939 WP_000818203.1 peptide-methionine (R)-S-oxide reductase MsrB -
  QMM33_RS04355 (PC0204_08500) - 852825..854549 (+) 1725 WP_000681691.1 ABC transporter ATP-binding protein -
  QMM33_RS04360 (PC0204_08510) rcrQ 854551..856299 (+) 1749 WP_000828850.1 ABC transporter ATP-binding protein Regulator
  QMM33_RS04365 (PC0204_08520) - 856601..857860 (+) 1260 WP_050249567.1 TRZ/ATZ family protein -
  QMM33_RS04370 (PC0204_08530) rplJ 858110..858610 (+) 501 WP_001287278.1 50S ribosomal protein L10 -
  QMM33_RS04375 (PC0204_08540) rplL 858686..859054 (+) 369 WP_001196960.1 50S ribosomal protein L7/L12 -
  QMM33_RS04380 (PC0204_08550) - 859241..859411 (+) 171 WP_001168348.1 hypothetical protein -
  QMM33_RS04385 (PC0204_08560) - 859411..859662 (+) 252 Protein_872 replication initiator protein A -
  QMM33_RS04390 (PC0204_08570) - 859649..859996 (+) 348 Protein_873 hypothetical protein -
  QMM33_RS04395 (PC0204_08580) - 859989..860369 (+) 381 WP_050240060.1 arsenate reductase -
  QMM33_RS04400 - 860382..860615 (+) 234 Protein_875 transcriptional regulator -
  QMM33_RS04405 (PC0204_08600) - 860618..861205 (+) 588 WP_050072242.1 type II CAAX endopeptidase family protein -

Sequence

Protein


Download         Length: 582 a.a.        Molecular weight: 64901.42 Da        Isoelectric Point: 7.3120

>NTDB_id=79272 QMM33_RS04360 WP_000828850.1 854551..856299(+) (rcrQ) [Streptococcus pneumoniae strain PZ900700204]
MKRQTVNQTLKRLVVDLANHPFLLFLAFLGTIAQVGLSIYLPILIGQVIDQVLVAGSSPVFWQIFLQMLLVVIGNTLVQW
ANPLLYNRLIFSYTRDLRERIIHKLHRLPIAFADRQGNGEMVSRVTTDIEQLAAGLTMIFNQFFIGVLMILVSILAMLQI
HLLMTLLVLLLTPLSMVISRFIAKRSYHLFQKQTETRGIQTQLIEESLSQQTIIQSFNAQTEFIQRLREAHDNYSGYSQS
AIFYSSTVNPSTRFVNALIYALLAGVGAYRIMMGSTLTVGRLVTFLNYVQQYTKPFNDISSVLAELQSALACVERIYGVL
DSPEVAETGKEVLTSDQVKGAISFKHVSFGYHPEKILIKELSIDIPAGSKVAIVGPTGAGKSTLINLLMRFYPISSGDIL
LDGQSIYDYTRVSLRQQFGMVLQETWLTQGTIHDNIAFGNPEASREQVIAAAKAANADFFIQQLPQGYDTKLENAGESLS
VGQAQLLTIARVFLAIPKILILDEATSSIDTRTEVLVQDAFAKLMKGRTSFIIAHRLSTIQDADLILVLVDGDIVEYGNH
QELMDRKGKYYQMQKAAAFSSE

Nucleotide


Download         Length: 1749 bp        

>NTDB_id=79272 QMM33_RS04360 WP_000828850.1 854551..856299(+) (rcrQ) [Streptococcus pneumoniae strain PZ900700204]
ATGAAACGACAAACTGTAAACCAGACGCTCAAACGTTTAGTCGTAGATTTAGCAAACCATCCCTTCCTCCTTTTCCTAGC
CTTTCTAGGAACTATTGCCCAAGTTGGCTTATCAATTTACCTACCTATTCTGATTGGGCAGGTCATTGACCAAGTCCTAG
TGGCTGGTTCATCACCAGTTTTTTGGCAGATTTTTCTCCAGATGCTCTTGGTGGTAATAGGAAATACTCTGGTACAATGG
GCCAATCCTCTCCTCTATAATCGTCTAATCTTCTCTTATACCAGAGATTTACGAGAGCGAATCATCCATAAACTCCATCG
GTTACCGATTGCTTTTGCGGATCGGCAAGGCAATGGAGAGATGGTCAGTCGTGTAACCACGGATATCGAACAGTTGGCAG
CTGGCTTGACCATGATTTTTAACCAATTTTTCATTGGTGTTTTGATGATTTTGGTTAGTATTCTAGCCATGCTCCAAATT
CATCTCCTCATGACTCTCTTAGTCTTGCTGTTGACGCCACTGTCCATGGTGATTTCACGCTTTATTGCCAAGAGATCCTA
TCATCTCTTCCAGAAGCAAACAGAGACGAGGGGAATTCAGACTCAGTTGATTGAAGAATCGCTTAGCCAGCAGACTATAA
TCCAGTCCTTCAATGCTCAAACAGAATTTATCCAAAGATTGCGTGAGGCTCATGACAACTACTCAGGCTATTCTCAGTCA
GCCATCTTTTATTCTTCAACGGTCAATCCTTCGACTCGCTTTGTAAATGCACTCATTTATGCCCTTTTAGCTGGAGTAGG
AGCTTATCGTATCATGATGGGTTCAACCTTGACCGTCGGTCGTTTAGTGACTTTTTTGAACTATGTTCAGCAATACACCA
AGCCCTTTAACGATATTTCTTCAGTGCTAGCTGAGTTGCAAAGTGCTCTGGCTTGCGTAGAGCGTATCTATGGGGTCTTA
GATAGCCCTGAAGTGGCTGAAACAGGTAAGGAAGTCTTGACCAGTGACCAAGTTAAGGGAGCTATTTCCTTTAAACATGT
CTCTTTTGGCTACCATCCTGAAAAAATTTTGATTAAGGAGTTGTCTATCGATATTCCAGCTGGTAGTAAGGTAGCCATCG
TTGGTCCGACAGGTGCTGGAAAATCAACTCTTATCAATCTCCTTATGCGTTTTTATCCCATTAGCTCGGGAGATATCTTG
CTGGATGGGCAATCCATTTATGATTATACACGAGTATCATTGAGACAGCAGTTTGGTATGGTGCTTCAAGAAACCTGGCT
CACACAAGGGACCATTCATGATAATATTGCCTTTGGCAATCCTGAAGCCAGTCGAGAGCAAGTAATTGCTGCTGCCAAAG
CAGCTAATGCAGACTTTTTCATCCAACAGTTGCCACAGGGATACGATACCAAGTTGGAAAATGCTGGAGAATCTCTCTCT
GTCGGCCAAGCTCAGCTCTTGACCATAGCCCGAGTCTTTCTGGCTATTCCAAAGATTCTTATCTTAGACGAGGCAACTTC
TTCCATTGATACACGGACAGAAGTGCTGGTACAGGATGCCTTTGCAAAACTCATGAAGGGCCGCACAAGCTTCATCATTG
CTCACCGTTTGTCAACCATTCAGGATGCGGATTTAATTCTTGTCTTAGTAGATGGTGATATTGTTGAATATGGTAACCAT
CAAGAACTCATGGATAGAAAGGGTAAGTATTACCAAATGCAAAAAGCTGCGGCTTTTAGTTCTGAATAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(24-295)

ABC transporter (ABC_tran)

(359-507)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

37.367

96.564

0.361