Detailed information NTG0790123

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: MGCS35922_RS09500
• Genome accession: NZ_CP118097
• Coordinates: 1920154..1921086 (-)
• Length: 310 a.a.
• NCBI ID: WP_003060110.1
• Uniprot ID: A0A9X8T5Q4
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain MGCS35922
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1915154..1926086

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MGCS35922_RS09475 (MGCS35922_03844)	tsaD	1915644..1916660 (-)	1017	WP_084916686.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-
MGCS35922_RS09480 (MGCS35922_03846)	rimI	1916650..1917075 (-)	426	WP_003056684.1	ribosomal protein S18-alanine N-acetyltransferase	-
MGCS35922_RS09485 (MGCS35922_03848)	tsaB	1917077..1917775 (-)	699	WP_065358518.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
MGCS35922_RS09490 (MGCS35922_03850)	-	1918061..1918291 (+)	231	WP_003056704.1	DNA-dependent RNA polymerase subunit epsilon	-
MGCS35922_RS09495 (MGCS35922_03852)	rnjA	1918293..1919975 (+)	1683	WP_003056700.1	ribonuclease J1	-
MGCS35922_RS09500 (MGCS35922_03854)	amiF	1920154..1921086 (-)	933	WP_003060110.1	ATP-binding cassette domain-containing protein	Regulator
MGCS35922_RS09505 (MGCS35922_03856)	oppD	1921079..1922131 (-)	1053	WP_012767556.1	ABC transporter ATP-binding protein	Regulator
MGCS35922_RS09510 (MGCS35922_03858)	-	1922143..1923174 (-)	1032	WP_065957283.1	ABC transporter permease	-
MGCS35922_RS09515 (MGCS35922_03860)	-	1923184..1924098 (-)	915	WP_003052794.1	ABC transporter permease	-
MGCS35922_RS09520 (MGCS35922_03862)	-	1924366..1926021 (-)	1656	WP_003058031.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 310 a.a.
• Molecular weight: 35203.02 Da
• Isoelectric Point: 6.6437

>NTDB_id=790123 MGCS35922_RS09500 WP_003060110.1 1920154..1921086(-) (amiF) [Streptococcus dysgalactiae subsp. equisimilis strain MGCS35922]
MNDNRKKLVELKNVSLTFNKGKKNEVKAIDNVSFDIYEGEVFGLVGESGSGKTTVGRAILKLYDINEGEIIFNGETVSHL
KGKDLRTFRKDAQMIFQDPQASLNGRMKIRDIVAEGLDIHGLTASKAEREERVQELLDLVGLNKDHLTRYPHEFSGGQRQ
RIGIARALAVKPKFIIADEPISALDVSIQAQVVNLMQKLQHKRGLTYLFIAHDLSMVKYISDRIGVMHWGKMLEIGTSDD
VYNHPIHPYTKSLLSAIPEPDPDKERQRVADVYDPSQELDGQERQMHEITPGHFVLATQEEADQYRREYH

Nucleotide

• Length: 933 bp

>NTDB_id=790123 MGCS35922_RS09500 WP_003060110.1 1920154..1921086(-) (amiF) [Streptococcus dysgalactiae subsp. equisimilis strain MGCS35922]
ATGAATGATAATCGAAAGAAATTAGTAGAGTTAAAAAATGTCTCCTTAACTTTCAATAAGGGAAAGAAAAACGAAGTCAA
AGCCATTGATAATGTGAGCTTTGATATTTATGAAGGGGAAGTGTTTGGACTGGTTGGGGAATCCGGATCAGGAAAAACAA
CTGTTGGTCGCGCCATTTTAAAGCTTTATGATATTAATGAAGGGGAAATTATTTTTAATGGTGAAACCGTTTCTCATTTG
AAAGGGAAAGACTTGCGGACCTTTCGTAAGGATGCTCAGATGATTTTCCAAGATCCTCAGGCTAGTCTTAACGGCCGTAT
GAAAATCAGAGATATTGTGGCAGAAGGGCTAGATATTCATGGACTCACAGCTTCAAAGGCAGAACGAGAAGAACGCGTGC
AAGAACTCCTTGATTTGGTTGGGTTGAACAAGGACCATTTGACACGTTACCCCCATGAATTTTCTGGTGGTCAACGTCAA
CGGATTGGGATTGCCCGTGCTTTGGCAGTTAAACCTAAATTTATCATTGCTGATGAACCTATCTCAGCTCTCGATGTGTC
GATTCAGGCCCAGGTAGTTAACTTGATGCAAAAGCTTCAGCACAAACGTGGATTGACCTATCTTTTTATTGCCCATGACT
TGTCAATGGTCAAATACATTTCTGACCGTATCGGAGTCATGCACTGGGGTAAAATGTTGGAGATTGGGACCTCAGATGAT
GTCTATAATCATCCTATTCATCCTTATACCAAGAGCCTACTCTCGGCTATTCCTGAACCAGATCCAGACAAAGAACGTCA
GCGGGTGGCTGATGTATATGATCCAAGTCAAGAATTGGACGGCCAAGAACGTCAGATGCATGAGATTACGCCAGGCCATT
TTGTCTTAGCTACCCAAGAAGAAGCAGACCAATATCGACGGGAGTATCATTAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-268)

• ABC transporter (ABC_tran) (30-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	54.098	98.387	0.532
amiF	Streptococcus thermophilus LMG 18311	53.77	98.387	0.529
amiF	Streptococcus salivarius strain HSISS4	53.443	98.387	0.526