Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   Q7642_RS03425 Genome accession   NZ_CP131652
Coordinates   722564..723238 (+) Length   224 a.a.
NCBI ID   WP_001166503.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 2008S01-206     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 717564..728238
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q7642_RS03400 (Q7642_03390) - 717777..718844 (+) 1068 WP_000980142.1 membrane protein -
  Q7642_RS03405 (Q7642_03395) - 718995..720038 (+) 1044 WP_001030761.1 alpha/beta hydrolase -
  Q7642_RS03410 (Q7642_03400) - 720367..720795 (+) 429 WP_048667626.1 hypothetical protein -
  Q7642_RS03415 (Q7642_03405) - 721006..721512 (-) 507 WP_000940132.1 GNAT family N-acetyltransferase -
  Q7642_RS03420 (Q7642_03410) graX 721625..722548 (+) 924 WP_000802949.1 auxiliary protein GraX/ApsX -
  Q7642_RS03425 (Q7642_03415) braR 722564..723238 (+) 675 WP_001166503.1 response regulator transcription factor GraR/ApsR Regulator
  Q7642_RS03430 (Q7642_03420) graS 723231..724271 (+) 1041 WP_001061270.1 histidine kinase GraS/ApsS -
  Q7642_RS03435 (Q7642_03425) vraF 724418..725179 (+) 762 WP_000153733.1 ABC transporter ATP-binding protein VraF -
  Q7642_RS03440 (Q7642_03430) - 725169..727058 (+) 1890 WP_000009402.1 ABC transporter permease -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26048.89 Da        Isoelectric Point: 4.3968

>NTDB_id=790105 Q7642_RS03425 WP_001166503.1 722564..723238(+) (braR) [Staphylococcus aureus strain 2008S01-206]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDQTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEIGMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=790105 Q7642_RS03425 WP_001166503.1 722564..723238(+) (braR) [Staphylococcus aureus strain 2008S01-206]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAGCCTTTTTATACAAATGTATT
AATTGCTAAATTACAAGCGATTTATCGCCGAGTGTATGAATTTACTGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGATCAGACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACTAAAAAAAATCAAATCGTTTCTAGAGATACAATTATTACTGCGCTATGGGATGATGAAGCATTTGT
CAGTGATAACACATTAACAGTTAATGTGAACCGATTACGTAAGAAACTATCTGAAATAGGGATGGACAGCGCAATTGAAA
CAAAAGTAGGAAAAGGATATATGGCACATGAATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-221)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.364

98.214

0.406