Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   PUW71_RS08210 Genome accession   NZ_CP118053
Coordinates   1600414..1602174 (-) Length   586 a.a.
NCBI ID   WP_150888760.1    Uniprot ID   -
Organism   Streptococcus anginosus strain VSI40     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1595414..1607174
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PUW71_RS08190 (PUW71_08190) - 1596096..1597943 (-) 1848 WP_070815100.1 APC family permease -
  PUW71_RS08195 (PUW71_08195) manA 1598210..1599154 (-) 945 WP_024052685.1 mannose-6-phosphate isomerase, class I -
  PUW71_RS08200 (PUW71_08200) - 1599185..1599910 (-) 726 WP_070815099.1 GntR family transcriptional regulator -
  PUW71_RS08205 (PUW71_08205) - 1599944..1600069 (-) 126 Protein_1574 PTS cellobiose transporter subunit IIC -
  PUW71_RS08210 (PUW71_08210) rcrQ 1600414..1602174 (-) 1761 WP_150888760.1 ABC transporter ATP-binding protein Regulator
  PUW71_RS08215 (PUW71_08215) rcrP 1602164..1603930 (-) 1767 WP_024052690.1 ABC transporter ATP-binding protein Regulator
  PUW71_RS08220 (PUW71_08220) - 1603923..1604381 (-) 459 WP_024052691.1 MarR family winged helix-turn-helix transcriptional regulator -
  PUW71_RS08225 (PUW71_08225) - 1604538..1604948 (-) 411 WP_024052692.1 peptide deformylase -
  PUW71_RS08230 (PUW71_08230) scrK 1605016..1605915 (-) 900 WP_024052693.1 fructokinase ScrK -

Sequence

Protein


Download         Length: 586 a.a.        Molecular weight: 64962.05 Da        Isoelectric Point: 6.3570

>NTDB_id=789617 PUW71_RS08210 WP_150888760.1 1600414..1602174(-) (rcrQ) [Streptococcus anginosus strain VSI40]
MENKKSSLFSQVKPYLKGFQLPLLIAFVGAAVSSIITVYGPDKLKEITNLITEGMRSQIDLKSISNIALFLAILYAAGAL
LNYVQSFIISSVIQHFSKRLRTAIAEKINKLPLRYFDSHSQGDTLSRVTNDVDTVGQSLNQSLGTVISSSLLLIAVLFMM
FYNNVVLSFVTISSVLIGFVFVALIMGKSQRFFRAQQENLASVNGYVEEMYSGHNVIVSYNATDESKVAFQTLNTNLYNS
MWKSQFISGIMMPLMMFVGNFGYVMVVLVGASMALNGDVTMGTIVAFMVYVRIFSQPLSQIAQGITTLQQASAAMGRVFE
FLAEPEMENDEHKAQQLTTLKGDVAFDKVFFGYNPDRTIIHDFSANAKAGQKIAIVGPTGAGKTTIVNLLMKFYEIDKGR
ITIDGVDTKKMKRSEVHDAFSMVLQDTWLFEGTIKENLIYNQKNISDEAVVAAAKAVGVHHFIKTLPKGYDTVLDDTVSL
SVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIRNADLILVMRDGNIIEQGN
HDQLMEKNGFYADLYNSQFDEDAEYA

Nucleotide


Download         Length: 1761 bp        

>NTDB_id=789617 PUW71_RS08210 WP_150888760.1 1600414..1602174(-) (rcrQ) [Streptococcus anginosus strain VSI40]
ATGGAAAATAAAAAATCGTCTTTATTTAGCCAAGTGAAACCTTATCTCAAAGGTTTTCAGCTTCCATTGCTCATTGCATT
TGTGGGAGCGGCAGTGTCTAGTATTATTACGGTTTATGGACCGGACAAATTAAAAGAAATTACCAACCTTATCACAGAGG
GGATGCGAAGTCAGATTGATTTGAAATCAATCTCCAACATTGCTCTTTTCTTAGCGATTTTGTACGCAGCAGGTGCTTTG
TTAAATTATGTTCAATCTTTTATCATTTCATCTGTTATTCAGCATTTCTCCAAGCGCTTGCGGACTGCTATTGCTGAAAA
AATCAATAAATTGCCTCTACGCTATTTTGACAGCCATTCCCAAGGGGACACTCTTTCACGGGTCACAAATGACGTGGATA
CTGTTGGGCAATCTTTGAACCAAAGTTTAGGAACGGTGATTTCATCAAGTTTACTGCTTATTGCGGTTCTCTTTATGATG
TTTTACAATAATGTGGTCTTGTCCTTTGTAACGATTAGCTCAGTCTTGATTGGCTTTGTCTTTGTTGCTTTGATTATGGG
AAAATCTCAACGATTCTTCCGAGCACAACAAGAAAATCTTGCCAGCGTCAATGGCTATGTGGAAGAAATGTACTCTGGGC
ATAATGTCATTGTCAGCTACAATGCCACAGACGAATCCAAAGTAGCCTTTCAAACACTTAATACTAACCTTTACAACAGT
ATGTGGAAATCACAATTCATTTCAGGGATTATGATGCCGCTTATGATGTTTGTAGGGAACTTCGGTTACGTTATGGTTGT
TTTGGTTGGAGCGAGCATGGCCTTGAATGGCGATGTCACTATGGGAACGATTGTTGCCTTTATGGTATATGTACGGATTT
TCTCTCAACCGTTGTCACAAATTGCACAAGGGATTACTACTCTTCAACAAGCTAGCGCTGCTATGGGACGCGTATTTGAA
TTTTTAGCAGAGCCTGAAATGGAAAATGATGAACACAAAGCGCAACAACTCACGACCCTAAAAGGAGATGTTGCCTTTGA
TAAGGTATTCTTTGGTTATAATCCAGATCGAACGATTATTCATGATTTCTCTGCCAATGCAAAAGCAGGACAAAAAATTG
CCATTGTCGGCCCGACCGGTGCTGGGAAGACGACCATTGTTAACTTGCTCATGAAATTTTATGAGATTGATAAGGGACGC
ATTACAATTGACGGTGTTGATACGAAGAAAATGAAACGTTCTGAGGTACACGATGCCTTCTCCATGGTTCTCCAAGACAC
CTGGTTATTTGAGGGGACGATTAAGGAAAATTTGATTTACAATCAGAAAAATATTTCTGACGAAGCAGTTGTGGCAGCTG
CCAAAGCTGTTGGGGTTCATCACTTCATCAAGACTTTGCCAAAAGGATACGATACGGTGCTGGACGATACAGTAAGCCTT
TCTGTGGGGCAAAAGCAATTGTTGACCATTGCGCGTGCACTTCTTAAGGATGCTCCCTTACTTATCTTGGATGAAGCGAC
TTCATCTGTTGATACGCGGACAGAAGAATTGATCCAAAAAGCGATGGATAAGTTGATGGAGGGAAGGACTTCTTTCGTCA
TTGCTCACCGCTTGTCGACCATTCGTAATGCTGATTTGATTTTGGTCATGCGTGATGGTAATATCATTGAACAAGGAAAT
CACGATCAATTGATGGAAAAAAATGGCTTCTATGCTGATCTTTACAATAGTCAATTCGATGAAGACGCAGAGTATGCGTA
A

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(23-298)

ABC transporter (ABC_tran)

(361-508)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

72.509

99.317

0.72