Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   PUW62_RS08535 Genome accession   NZ_CP118046
Coordinates   1688837..1690597 (-) Length   586 a.a.
NCBI ID   WP_274996962.1    Uniprot ID   -
Organism   Streptococcus anginosus strain VSI52     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1683837..1695597
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PUW62_RS08515 (PUW62_08515) - 1684518..1686365 (-) 1848 WP_024052684.1 APC family permease -
  PUW62_RS08520 (PUW62_08520) manA 1686632..1687576 (-) 945 WP_024052685.1 mannose-6-phosphate isomerase, class I -
  PUW62_RS08525 (PUW62_08525) - 1687607..1688333 (-) 727 Protein_1637 GntR family transcriptional regulator -
  PUW62_RS08530 (PUW62_08530) - 1688367..1688492 (-) 126 Protein_1638 PTS cellobiose transporter subunit IIC -
  PUW62_RS08535 (PUW62_08535) rcrQ 1688837..1690597 (-) 1761 WP_274996962.1 ABC transporter ATP-binding protein Regulator
  PUW62_RS08540 (PUW62_08540) rcrP 1690587..1692353 (-) 1767 WP_024052690.1 ABC transporter ATP-binding protein Regulator
  PUW62_RS08545 (PUW62_08545) - 1692346..1692804 (-) 459 WP_024052691.1 MarR family winged helix-turn-helix transcriptional regulator -
  PUW62_RS08550 (PUW62_08550) - 1692961..1693371 (-) 411 WP_024052692.1 peptide deformylase -
  PUW62_RS08555 (PUW62_08555) scrK 1693439..1694338 (-) 900 WP_024052693.1 fructokinase ScrK -

Sequence

Protein


Download         Length: 586 a.a.        Molecular weight: 64865.88 Da        Isoelectric Point: 6.3561

>NTDB_id=789486 PUW62_RS08535 WP_274996962.1 1688837..1690597(-) (rcrQ) [Streptococcus anginosus strain VSI52]
MENKKSSLFSQVKPYLKGFQLPLLIAFVGAAVSSIITVYGPDKLKEITNLITEGMRSQIDLKSISNIALFLAILYAAGAL
LNYVQSFIISSVVQHFSKRLRTAIAEKINKLPLRYFDSHSQGDTLSRVTNDVDTVGQSLNQSLGTVISSSLLLIAVLFMM
FYNNVVLSFVTISSVLIGFVFVALIMGKSQRFFRAQQENLASVNGYVEEMYSGHNVIVSYNATDESKVAFQTLNTNLYNS
MWKSQFISGIMMPLMMFVGNFGYVMVVLVGASMALNGDVTMGTIVAFMVYVRIFSQPLSQIAQGITTLQQASAAMGRVFE
FLAESEMENDEHKAQQLTTLKGDVAFDKVFFGYNPDRTIIHDFSANAKAGQKIAIVGPTGAGKTTIVNLLMKFYEIDKGR
ITIDGVDTKQMKRSEVHDAFSMVLQDTWLFEGTIKENLIYNQKNISDEAVVAAAKAVGVHHFIKTLPKGYDTVLDDTVSL
SVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIRNADLILVMRDGNIIEQGN
HDQLMGKNGFYADLYNSQFDEDAEYA

Nucleotide


Download         Length: 1761 bp        

>NTDB_id=789486 PUW62_RS08535 WP_274996962.1 1688837..1690597(-) (rcrQ) [Streptococcus anginosus strain VSI52]
ATGGAAAATAAAAAATCGTCTTTATTTAGCCAAGTGAAACCTTATCTCAAAGGTTTTCAGCTTCCATTGCTCATTGCATT
TGTGGGAGCGGCAGTGTCTAGTATTATTACGGTTTATGGACCGGACAAATTAAAAGAAATTACCAACCTTATCACAGAGG
GGATGCGAAGTCAGATTGATTTGAAATCAATCTCCAACATTGCTCTTTTCTTAGCGATTTTGTACGCAGCAGGTGCTTTG
TTAAATTATGTTCAATCTTTTATCATTTCATCTGTTGTTCAGCATTTCTCCAAGCGCTTGCGGACTGCTATTGCTGAAAA
AATCAATAAATTGCCTCTACGCTATTTTGACAGCCATTCCCAAGGGGACACTCTTTCACGGGTCACAAATGACGTGGATA
CTGTTGGGCAATCTTTGAACCAAAGTTTAGGAACGGTGATTTCATCAAGTTTACTGCTTATTGCGGTTCTCTTTATGATG
TTTTACAATAATGTGGTCTTGTCCTTTGTAACGATTAGCTCAGTCTTGATTGGCTTTGTCTTTGTTGCTTTGATTATGGG
AAAATCTCAACGATTTTTCCGAGCACAACAAGAAAATCTTGCCAGTGTCAATGGCTATGTGGAAGAAATGTACTCTGGGC
ATAATGTCATTGTCAGTTACAATGCCACAGACGAATCCAAAGTAGCCTTTCAAACACTTAATACTAACCTTTACAACAGT
ATGTGGAAATCACAATTCATTTCAGGGATTATGATGCCGCTTATGATGTTTGTAGGGAACTTCGGTTACGTTATGGTTGT
TTTGGTTGGAGCGAGCATGGCCTTGAATGGCGATGTCACTATGGGAACGATTGTTGCTTTTATGGTATATGTACGGATTT
TCTCTCAACCGTTGTCACAAATTGCACAAGGGATTACTACTCTTCAACAAGCTAGCGCTGCTATGGGACGCGTATTTGAA
TTTTTAGCAGAGTCTGAAATGGAAAATGATGAACACAAAGCGCAACAACTCACGACCCTAAAAGGAGATGTTGCCTTTGA
TAAGGTATTCTTTGGTTATAATCCAGATCGAACGATTATTCATGATTTCTCTGCCAATGCCAAAGCAGGGCAAAAAATTG
CCATTGTCGGTCCGACCGGTGCTGGGAAGACGACCATTGTTAACTTGCTCATGAAATTTTATGAGATTGATAAGGGACGC
ATTACAATTGACGGTGTTGATACGAAGCAAATGAAACGTTCTGAGGTACACGATGCCTTCTCCATGGTTCTCCAAGACAC
CTGGTTATTTGAGGGAACGATTAAGGAAAATTTGATTTACAATCAGAAAAATATTTCTGACGAAGCAGTTGTGGCAGCTG
CCAAAGCTGTTGGGGTTCATCACTTCATCAAGACTTTGCCAAAAGGATACGATACGGTGCTGGACGATACAGTAAGCCTT
TCTGTGGGGCAAAAGCAATTGTTGACCATTGCGCGTGCACTTCTTAAGGATGCTCCCTTACTTATCTTGGATGAAGCGAC
TTCATCTGTTGATACGCGGACAGAAGAATTGATCCAAAAAGCGATGGATAAGTTGATGGAGGGAAGGACTTCTTTCGTCA
TTGCTCACCGCTTGTCGACCATTCGTAATGCTGATTTGATTTTGGTCATGCGTGATGGTAATATCATTGAACAAGGAAAT
CACGATCAATTGATGGGAAAAAATGGCTTCTATGCTGATCTTTACAATAGTCAATTCGATGAAGACGCAGAGTATGCGTA
A

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(23-298)

ABC transporter (ABC_tran)

(361-508)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

72.337

99.317

0.718