Detailed information NTG0787498

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: PTC93_RS07735
• Genome accession: NZ_CP117762
• Coordinates: 1575809..1576510 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain 2022CK-00839
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1570809..1581510

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PTC93_RS07700 (PTC93_07690)	kdsB	1571332..1572093 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
PTC93_RS07705 (PTC93_07695)	-	1572105..1573085 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
PTC93_RS07710 (PTC93_07700)	-	1573097..1573438 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
PTC93_RS07715 (PTC93_07705)	-	1573456..1574229 (+)	774	WP_000497298.1	TatD family hydrolase	-
PTC93_RS07720 (PTC93_07710)	-	1574267..1574875 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
PTC93_RS07725 (PTC93_07715)	-	1574885..1575439 (+)	555	WP_000841373.1	type II secretion system protein	-
PTC93_RS07730 (PTC93_07720)	xcpV	1575429..1575809 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
PTC93_RS07735 (PTC93_07725)	xcpW	1575809..1576510 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
PTC93_RS07740 (PTC93_07730)	gspK	1576510..1577469 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
PTC93_RS07745 (PTC93_07735)	-	1577700..1578296 (+)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
PTC93_RS07750 (PTC93_07740)	ung	1578347..1579060 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
PTC93_RS07755 (PTC93_07745)	-	1579057..1580181 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
PTC93_RS07760 (PTC93_07750)	tadA	1580188..1580691 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
PTC93_RS07765 (PTC93_07755)	-	1580761..1581204 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=787498 PTC93_RS07735 WP_000594589.1 1575809..1576510(+) (xcpW) [Acinetobacter baumannii strain 2022CK-00839]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=787498 PTC93_RS07735 WP_000594589.1 1575809..1576510(+) (xcpW) [Acinetobacter baumannii strain 2022CK-00839]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996