Detailed information NTG0787451

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: PTC92_RS09695
• Genome accession: NZ_CP117759
• Coordinates: 2071421..2072122 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain 2022CK-00843
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2066421..2077122

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PTC92_RS09665 (PTC92_09665)	-	2066727..2067170 (-)	444	WP_001246675.1	SRPBCC family protein	-
PTC92_RS09670 (PTC92_09670)	tadA	2067240..2067743 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
PTC92_RS09675 (PTC92_09675)	-	2067750..2068874 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
PTC92_RS09680 (PTC92_09680)	ung	2068871..2069584 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
PTC92_RS09685 (PTC92_09685)	-	2069635..2070231 (-)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
PTC92_RS09690 (PTC92_09690)	gspK	2070462..2071421 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
PTC92_RS09695 (PTC92_09695)	xcpW	2071421..2072122 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
PTC92_RS09700 (PTC92_09700)	xcpV	2072122..2072502 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
PTC92_RS09705 (PTC92_09705)	-	2072492..2073046 (-)	555	WP_000841373.1	type II secretion system protein	-
PTC92_RS09710 (PTC92_09710)	-	2073056..2073664 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
PTC92_RS09715 (PTC92_09715)	-	2073702..2074475 (-)	774	WP_000497298.1	TatD family hydrolase	-
PTC92_RS09720 (PTC92_09720)	-	2074493..2074834 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
PTC92_RS09725 (PTC92_09725)	-	2074846..2075826 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
PTC92_RS09730 (PTC92_09730)	kdsB	2075838..2076599 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=787451 PTC92_RS09695 WP_000594589.1 2071421..2072122(-) (xcpW) [Acinetobacter baumannii strain 2022CK-00843]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=787451 PTC92_RS09695 WP_000594589.1 2071421..2072122(-) (xcpW) [Acinetobacter baumannii strain 2022CK-00843]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996