Detailed information NTG0787277

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: PTC89_RS10330
• Genome accession: NZ_CP117728
• Coordinates: 2164123..2164824 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain 2022CK-00783
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2159123..2169824

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PTC89_RS10300 (PTC89_10300)	-	2159429..2159872 (-)	444	WP_001246675.1	SRPBCC family protein	-
PTC89_RS10305 (PTC89_10305)	tadA	2159942..2160445 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
PTC89_RS10310 (PTC89_10310)	-	2160452..2161576 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
PTC89_RS10315 (PTC89_10315)	ung	2161573..2162286 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
PTC89_RS10320 (PTC89_10320)	-	2162337..2162933 (-)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
PTC89_RS10325 (PTC89_10325)	gspK	2163164..2164123 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
PTC89_RS10330 (PTC89_10330)	xcpW	2164123..2164824 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
PTC89_RS10335 (PTC89_10335)	xcpV	2164824..2165204 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
PTC89_RS10340 (PTC89_10340)	-	2165194..2165748 (-)	555	WP_000841373.1	type II secretion system protein	-
PTC89_RS10345 (PTC89_10345)	-	2165758..2166366 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
PTC89_RS10350 (PTC89_10350)	-	2166404..2167177 (-)	774	WP_000497298.1	TatD family hydrolase	-
PTC89_RS10355 (PTC89_10355)	-	2167195..2167536 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
PTC89_RS10360 (PTC89_10360)	-	2167548..2168528 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
PTC89_RS10365 (PTC89_10365)	kdsB	2168540..2169301 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=787277 PTC89_RS10330 WP_000594589.1 2164123..2164824(-) (xcpW) [Acinetobacter baumannii strain 2022CK-00783]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=787277 PTC89_RS10330 WP_000594589.1 2164123..2164824(-) (xcpW) [Acinetobacter baumannii strain 2022CK-00783]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996