Detailed information NTG0786736

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: Q5R37_RS22455
• Genome accession: NZ_CP130706
• Coordinates: 4643284..4644288 (-)
• Length: 334 a.a.
• NCBI ID: WP_039023208.1
• Uniprot ID: -
• Organism: Escherichia coli strain DDG220
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 4638284..4649288

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q5R37_RS22435 (Q5R37_22435)	bcsF	4639446..4639637 (+)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-
Q5R37_RS22440 (Q5R37_22440)	bcsG	4639634..4641313 (+)	1680	WP_000191619.1	cellulose biosynthesis protein BcsG	-
Q5R37_RS22445 (Q5R37_22445)	ldrD	4641400..4641507 (-)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
Q5R37_RS22450 (Q5R37_22450)	yhjV	4641983..4643254 (+)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
Q5R37_RS22455 (Q5R37_22455)	amiE	4643284..4644288 (-)	1005	WP_039023208.1	dipeptide ABC transporter ATP-binding subunit DppF	Regulator
Q5R37_RS22460 (Q5R37_22460)	amiE	4644285..4645268 (-)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
Q5R37_RS22465 (Q5R37_22465)	dppC	4645279..4646181 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
Q5R37_RS22470 (Q5R37_22470)	dppB	4646191..4647210 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
Q5R37_RS24995	-	4647228..4647455 (+)	228	WP_001300936.1	hypothetical protein	-
Q5R37_RS22480 (Q5R37_22480)	dppA	4647518..4649125 (-)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 37507.38 Da
• Isoelectric Point: 8.7508

>NTDB_id=786736 Q5R37_RS22455 WP_039023208.1 4643284..4644288(-) (amiE) [Escherichia coli strain DDG220]
MSTQEATLQQPLLQAIDLKKHYPVKKGMFAPERLVKALDGVSFNLERGKTLAVVGESGCGKSTLGRLLTMIEMPTGGELY
YQGQDLLKHDPQAQKLRRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSKEQRREKALSMMAKVGLKTEHYDRYPH
MFSGGQRQRIAIARGLMLDPDVVIADEPVSALDVSVRAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRC
VEKGTKDQIFNNPCHPYTQALLSATPRLNPDDRRERIKLSGELPSPLNPPPGCAFNARCRRRFGPCTQLQPQLKDYGGQL
VACFAVDQDENPQR

Nucleotide

• Length: 1005 bp

>NTDB_id=786736 Q5R37_RS22455 WP_039023208.1 4643284..4644288(-) (amiE) [Escherichia coli strain DDG220]
ATGAGTACGCAAGAGGCCACCCTGCAACAACCGCTGTTGCAGGCTATCGACCTGAAAAAACATTATCCGGTGAAGAAAGG
CATGTTCGCGCCGGAACGTCTGGTTAAAGCGCTGGATGGCGTTTCGTTTAACCTTGAACGTGGCAAAACGCTGGCAGTAG
TGGGCGAATCTGGCTGCGGTAAATCGACCCTCGGTCGGTTGCTGACGATGATTGAAATGCCCACCGGTGGCGAGCTGTAT
TACCAGGGGCAGGATCTGCTTAAGCACGATCCGCAGGCGCAGAAGCTGCGTCGGCAGAAAATCCAGATCGTCTTCCAGAA
CCCTTACGGTTCGCTGAATCCGCGTAAAAAAGTCGGGCAAATTCTTGAAGAGCCGCTGCTGATCAACACCAGCTTAAGCA
AAGAACAGCGTCGGGAAAAAGCCCTGTCGATGATGGCGAAAGTCGGCCTGAAAACCGAGCACTATGACCGCTATCCGCAT
ATGTTCTCCGGCGGTCAGCGTCAGCGTATCGCCATCGCCCGTGGTCTGATGCTCGACCCGGATGTGGTGATTGCCGATGA
ACCGGTTTCCGCGCTGGATGTTTCAGTGCGCGCGCAGGTGCTGAATCTGATGATGGATTTGCAGCAGGAGTTGGGGCTGT
CTTATGTCTTTATCTCCCACGACCTGTCGGTGGTGGAGCACATTGCTGATGAAGTGATGGTGATGTACCTGGGCCGCTGC
GTGGAGAAGGGAACGAAAGACCAAATCTTCAATAACCCGTGCCATCCGTACACTCAGGCGCTACTTTCCGCGACGCCGCG
CCTGAACCCGGACGATCGCCGCGAGCGCATCAAGCTCAGCGGTGAACTACCAAGCCCACTGAATCCACCGCCGGGTTGCG
CCTTCAACGCCCGCTGTCGTCGGCGCTTCGGCCCCTGCACCCAGTTGCAGCCGCAGCTAAAAGACTACGGCGGTCAACTG
GTAGCTTGTTTTGCTGTTGATCAGGATGAAAATCCGCAGCGTTAA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (241-306)

• ABC transporter (ABC_tran) (38-189)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	40.878	88.623	0.362