Detailed information NTG0785902

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: Q4I20_RS14940
• Genome accession: NZ_CP130597
• Coordinates: 2812374..2813639 (+)
• Length: 421 a.a.
• NCBI ID: WP_004398500.1
• Uniprot ID: O34528
• Organism: Bacillus subtilis strain NCIB_3610
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2807374..2818639

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q4I20_RS14920 (Q4I20_14915)	yrrB	2808745..2809365 (-)	621	WP_010886584.1	tetratricopeptide repeat protein	-
Q4I20_RS14925 (Q4I20_14920)	mnmA	2809451..2810566 (-)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
Q4I20_RS14930 (Q4I20_14925)	iscSA	2810597..2811736 (-)	1140	WP_003246057.1	cysteine desulfurase family protein	-
Q4I20_RS14935 (Q4I20_14930)	cymR	2811755..2812171 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
Q4I20_RS14940 (Q4I20_14935)	rarA	2812374..2813639 (+)	1266	WP_004398500.1	replication-associated recombination protein A	Machinery gene
Q4I20_RS14945 (Q4I20_14940)	tcdA	2813681..2814445 (-)	765	WP_009967893.1	ThiF family adenylyltransferase	-
Q4I20_RS14955 (Q4I20_14950)	aspS	2814781..2816559 (-)	1779	WP_003229758.1	aspartate--tRNA ligase	-
Q4I20_RS14960 (Q4I20_14955)	hisS	2816573..2817847 (-)	1275	WP_003229755.1	histidine--tRNA ligase	-
Q4I20_RS14965 (Q4I20_14960)	yrzK	2818229..2818399 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46514.38 Da
• Isoelectric Point: 7.2043

>NTDB_id=785902 Q4I20_RS14940 WP_004398500.1 2812374..2813639(+) (rarA) [Bacillus subtilis strain NCIB_3610]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPELIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=785902 Q4I20_RS14940 WP_004398500.1 2812374..2813639(+) (rarA) [Bacillus subtilis strain NCIB_3610]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGAATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGAACTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCAATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAGGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACTGGAAAGTTCGAATCTGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

3D structure

• AlphaFold DB: O34528

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	100	100	1