Detailed information NTG0783405

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: MGCS35957_RS09925
• Genome accession: NZ_CP117288
• Coordinates: 1979285..1980217 (-)
• Length: 310 a.a.
• NCBI ID: WP_003060110.1
• Uniprot ID: A0A9X8T5Q4
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain MGCS35957
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1974285..1985217

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MGCS35957_RS09900 (MGCS35957_04044)	tsaD	1974775..1975791 (-)	1017	WP_084916686.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-
MGCS35957_RS09905 (MGCS35957_04046)	rimI	1975781..1976206 (-)	426	WP_003056684.1	ribosomal protein S18-alanine N-acetyltransferase	-
MGCS35957_RS09910 (MGCS35957_04048)	tsaB	1976208..1976906 (-)	699	WP_065358518.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
MGCS35957_RS09915 (MGCS35957_04050)	-	1977192..1977422 (+)	231	WP_003056704.1	DNA-dependent RNA polymerase subunit epsilon	-
MGCS35957_RS09920 (MGCS35957_04052)	rnjA	1977424..1979106 (+)	1683	WP_003056700.1	ribonuclease J1	-
MGCS35957_RS09925 (MGCS35957_04054)	amiF	1979285..1980217 (-)	933	WP_003060110.1	ATP-binding cassette domain-containing protein	Regulator
MGCS35957_RS09930 (MGCS35957_04056)	oppD	1980210..1981262 (-)	1053	WP_012767556.1	ABC transporter ATP-binding protein	Regulator
MGCS35957_RS09935 (MGCS35957_04058)	-	1981274..1982305 (-)	1032	WP_065957283.1	ABC transporter permease	-
MGCS35957_RS09940 (MGCS35957_04060)	-	1982315..1983229 (-)	915	WP_003052794.1	ABC transporter permease	-
MGCS35957_RS09945 (MGCS35957_04062)	-	1983497..1985152 (-)	1656	WP_003058031.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 310 a.a.
• Molecular weight: 35203.02 Da
• Isoelectric Point: 6.6437

>NTDB_id=783405 MGCS35957_RS09925 WP_003060110.1 1979285..1980217(-) (amiF) [Streptococcus dysgalactiae subsp. equisimilis strain MGCS35957]
MNDNRKKLVELKNVSLTFNKGKKNEVKAIDNVSFDIYEGEVFGLVGESGSGKTTVGRAILKLYDINEGEIIFNGETVSHL
KGKDLRTFRKDAQMIFQDPQASLNGRMKIRDIVAEGLDIHGLTASKAEREERVQELLDLVGLNKDHLTRYPHEFSGGQRQ
RIGIARALAVKPKFIIADEPISALDVSIQAQVVNLMQKLQHKRGLTYLFIAHDLSMVKYISDRIGVMHWGKMLEIGTSDD
VYNHPIHPYTKSLLSAIPEPDPDKERQRVADVYDPSQELDGQERQMHEITPGHFVLATQEEADQYRREYH

Nucleotide

• Length: 933 bp

>NTDB_id=783405 MGCS35957_RS09925 WP_003060110.1 1979285..1980217(-) (amiF) [Streptococcus dysgalactiae subsp. equisimilis strain MGCS35957]
ATGAATGATAATCGAAAGAAATTAGTAGAGTTAAAAAATGTCTCCTTAACTTTCAATAAGGGAAAGAAAAACGAAGTCAA
AGCCATTGATAATGTGAGCTTTGATATTTATGAAGGGGAAGTGTTTGGACTGGTTGGGGAATCCGGATCAGGAAAAACAA
CTGTTGGTCGCGCCATTTTAAAGCTTTATGATATTAATGAAGGGGAAATTATTTTTAATGGTGAAACCGTTTCTCATTTG
AAAGGGAAAGACTTGCGGACCTTTCGTAAGGATGCTCAGATGATTTTCCAAGATCCTCAGGCTAGTCTTAACGGCCGTAT
GAAAATCAGAGATATTGTGGCAGAAGGGCTAGATATTCATGGACTCACAGCTTCAAAGGCAGAACGAGAAGAACGCGTGC
AAGAACTCCTTGATTTGGTTGGGTTGAACAAGGACCATTTGACACGTTACCCCCATGAATTTTCTGGTGGTCAACGTCAA
CGGATTGGGATTGCCCGTGCTTTGGCAGTTAAACCTAAATTTATCATTGCTGATGAACCTATCTCAGCTCTCGATGTGTC
GATTCAGGCCCAGGTAGTTAACTTGATGCAAAAGCTTCAGCACAAACGTGGATTGACCTATCTTTTTATTGCCCATGACT
TGTCAATGGTCAAATACATTTCTGACCGTATCGGAGTCATGCACTGGGGTAAAATGTTGGAGATTGGGACCTCAGATGAT
GTCTATAATCATCCTATTCATCCTTATACCAAGAGCCTACTCTCGGCTATTCCTGAACCAGATCCAGACAAAGAACGTCA
GCGGGTGGCTGATGTATATGATCCAAGTCAAGAATTGGACGGCCAAGAACGTCAGATGCATGAGATTACGCCAGGCCATT
TTGTCTTAGCTACCCAAGAAGAAGCAGACCAATATCGACGGGAGTATCATTAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-268)

• ABC transporter (ABC_tran) (30-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	54.098	98.387	0.532
amiF	Streptococcus thermophilus LMG 18311	53.77	98.387	0.529
amiF	Streptococcus salivarius strain HSISS4	53.443	98.387	0.526