Detailed information NTG0783238

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: Q3V79_RS08095
• Genome accession: NZ_CP130513
• Coordinates: 1674101..1675375 (+)
• Length: 424 a.a.
• NCBI ID: WP_000102740.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain SA29-SX
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1669101..1680375

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q3V79_RS08065	mnmA	1669303..1670421 (-)	1119	WP_000066094.1	tRNA 2-thiouridine(34) synthase MnmA	-
Q3V79_RS08070	-	1670422..1671564 (-)	1143	WP_000409158.1	cysteine desulfurase family protein	-
Q3V79_RS08075	-	1671876..1672889 (+)	1014	WP_000985895.1	LLM class flavin-dependent oxidoreductase	-
Q3V79_RS08080	-	1673126..1673272 (-)	147	WP_000009238.1	SAS049 family protein	-
Q3V79_RS08085	-	1673312..1673494 (-)	183	WP_000752909.1	CsbD family protein	-
Q3V79_RS08090	-	1673594..1674016 (-)	423	WP_000704122.1	Rrf2 family transcriptional regulator	-
Q3V79_RS08095	rarA	1674101..1675375 (+)	1275	WP_000102740.1	replication-associated recombination protein A	Machinery gene
Q3V79_RS08100	-	1675536..1676309 (-)	774	WP_000682646.1	ThiF family adenylyltransferase	-
Q3V79_RS08105	-	1676309..1676437 (-)	129	WP_001790559.1	hypothetical protein	-
Q3V79_RS08115	aspS	1676770..1678536 (-)	1767	WP_000044799.1	aspartate--tRNA ligase	-
Q3V79_RS08120	hisS	1678552..1679814 (-)	1263	WP_000590826.1	histidine--tRNA ligase	-

Sequence

Protein

• Length: 424 a.a.
• Molecular weight: 47264.84 Da
• Isoelectric Point: 8.3539

>NTDB_id=783238 Q3V79_RS08095 WP_000102740.1 1674101..1675375(+) (rarA) [Staphylococcus aureus strain SA29-SX]
MSTEPLASRMRPKNIDEIISQQHLVGPRGIIRRMVDTKKLTSMIFYGPPGIGKTSIAKAISGSTQYKFRQLNAVTNTKKD
MQLVVEEAKMSGQVILLLDEIHRLDKAKQDFLLPHLENGKIVLIGATTSNPYHAINPAIRSRAQIFELYPLNDEDVRQAL
TRAIEDEENGLKTYQPKIDEDAMTYFSTQSQGDVRSALNALELAVLSADNDKDGYRHVTLQDAKDCLQKGAFVSDKDGDM
HYDVMSAFQKSIRGSDVNAALHYLARLIEAGDLPTIVRRLLVISYEDIGLASPNAGQRTLAAIESAERLGLPEARIPLSQ
AVIELCLSPKSNSAMSAIDSALSDIRNGHVGQIPNHLKDGHYQGAKDLGRSIGYKYPHQYVNGYVSQQYLPDKLKNKIYY
EPKTTSKSEQQLKEIYNNLLKQRP

Nucleotide

• Length: 1275 bp

>NTDB_id=783238 Q3V79_RS08095 WP_000102740.1 1674101..1675375(+) (rarA) [Staphylococcus aureus strain SA29-SX]
GTGAGTACAGAACCATTAGCATCGAGAATGCGCCCAAAAAATATAGATGAAATCATTTCCCAACAACATTTAGTTGGACC
AAGAGGCATTATCAGAAGAATGGTTGATACAAAAAAATTAACTTCAATGATTTTTTATGGTCCACCTGGTATAGGCAAAA
CAAGTATTGCCAAAGCAATTTCGGGCAGTACGCAATATAAATTCAGACAATTGAATGCTGTAACTAACACTAAAAAAGAT
ATGCAACTTGTTGTTGAAGAAGCTAAAATGTCTGGTCAAGTTATCTTGTTATTAGATGAAATACATCGACTAGATAAAGC
TAAACAAGACTTTTTATTACCTCATTTAGAAAATGGCAAAATCGTCTTGATCGGTGCTACAACTTCAAATCCTTATCATG
CTATCAATCCAGCGATTCGTTCAAGAGCGCAAATTTTTGAGTTATATCCTTTAAATGATGAAGATGTGCGCCAAGCGTTA
ACTCGTGCAATAGAAGATGAAGAGAATGGTTTGAAAACATATCAACCCAAAATTGATGAAGATGCCATGACCTACTTTTC
TACACAAAGTCAAGGTGATGTTCGTAGTGCGTTAAATGCATTGGAATTAGCTGTATTAAGCGCAGATAATGACAAAGACG
GTTATCGACATGTTACATTGCAAGATGCTAAAGACTGTTTACAAAAAGGTGCATTTGTAAGTGATAAGGATGGTGACATG
CATTACGATGTTATGAGCGCTTTCCAAAAATCTATCCGTGGTAGCGACGTCAATGCCGCTTTACATTATTTAGCACGATT
AATTGAAGCTGGAGATTTACCTACAATAGTTCGACGATTACTTGTAATTAGCTATGAGGATATAGGCTTAGCCTCACCTA
ATGCTGGTCAGAGAACACTTGCTGCTATTGAATCAGCAGAACGTCTAGGTTTACCAGAAGCTAGAATTCCACTAAGCCAA
GCAGTAATCGAACTATGCTTATCACCTAAGTCAAATTCAGCAATGAGTGCCATTGATAGTGCATTGTCCGATATTAGAAA
CGGTCATGTGGGCCAAATTCCAAACCATTTAAAAGATGGACATTATCAAGGTGCTAAAGATCTAGGCCGATCTATTGGTT
ACAAATATCCACACCAATATGTTAATGGCTATGTTTCACAGCAATATTTACCTGATAAACTTAAAAACAAAATTTATTAT
GAACCAAAAACGACATCTAAAAGTGAACAACAACTCAAAGAAATATATAACAACTTACTTAAACAAAGGCCGTAA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (254-418)

• ATPase family associated with various cellular activities (AAA) (AAA) (43-145)

• AAA C-terminal domain (AAA_assoc_2) (175-253)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	69.286	99.057	0.686