Detailed information NTG0783229

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: MGCS36083_RS09750
• Genome accession: NZ_CP117285
• Coordinates: 1958728..1959660 (-)
• Length: 310 a.a.
• NCBI ID: WP_003060110.1
• Uniprot ID: A0A9X8T5Q4
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain MGCS36083
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1953728..1964660

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MGCS36083_RS09725 (MGCS36083_03942)	tsaD	1954218..1955234 (-)	1017	WP_084916686.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-
MGCS36083_RS09730 (MGCS36083_03944)	rimI	1955224..1955649 (-)	426	WP_003056684.1	ribosomal protein S18-alanine N-acetyltransferase	-
MGCS36083_RS09735 (MGCS36083_03946)	tsaB	1955651..1956349 (-)	699	WP_065358518.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
MGCS36083_RS09740 (MGCS36083_03948)	-	1956635..1956865 (+)	231	WP_003056704.1	DNA-dependent RNA polymerase subunit epsilon	-
MGCS36083_RS09745 (MGCS36083_03950)	rnjA	1956867..1958549 (+)	1683	WP_003056700.1	ribonuclease J1	-
MGCS36083_RS09750 (MGCS36083_03952)	amiF	1958728..1959660 (-)	933	WP_003060110.1	ABC transporter ATP-binding protein	Regulator
MGCS36083_RS09755 (MGCS36083_03954)	oppD	1959653..1960705 (-)	1053	WP_012767556.1	ABC transporter ATP-binding protein	Regulator
MGCS36083_RS09760 (MGCS36083_03956)	-	1960717..1961748 (-)	1032	WP_065957283.1	ABC transporter permease	-
MGCS36083_RS09765 (MGCS36083_03958)	-	1961758..1962672 (-)	915	WP_003052794.1	ABC transporter permease	-
MGCS36083_RS09770 (MGCS36083_03960)	-	1962940..1964595 (-)	1656	WP_003058031.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 310 a.a.
• Molecular weight: 35203.02 Da
• Isoelectric Point: 6.6437

>NTDB_id=783229 MGCS36083_RS09750 WP_003060110.1 1958728..1959660(-) (amiF) [Streptococcus dysgalactiae subsp. equisimilis strain MGCS36083]
MNDNRKKLVELKNVSLTFNKGKKNEVKAIDNVSFDIYEGEVFGLVGESGSGKTTVGRAILKLYDINEGEIIFNGETVSHL
KGKDLRTFRKDAQMIFQDPQASLNGRMKIRDIVAEGLDIHGLTASKAEREERVQELLDLVGLNKDHLTRYPHEFSGGQRQ
RIGIARALAVKPKFIIADEPISALDVSIQAQVVNLMQKLQHKRGLTYLFIAHDLSMVKYISDRIGVMHWGKMLEIGTSDD
VYNHPIHPYTKSLLSAIPEPDPDKERQRVADVYDPSQELDGQERQMHEITPGHFVLATQEEADQYRREYH

Nucleotide

• Length: 933 bp

>NTDB_id=783229 MGCS36083_RS09750 WP_003060110.1 1958728..1959660(-) (amiF) [Streptococcus dysgalactiae subsp. equisimilis strain MGCS36083]
ATGAATGATAATCGAAAGAAATTAGTAGAGTTAAAAAATGTCTCCTTAACTTTCAATAAGGGAAAGAAAAACGAAGTCAA
AGCCATTGATAATGTGAGCTTTGATATTTATGAAGGGGAAGTGTTTGGACTGGTTGGGGAATCCGGATCAGGAAAAACAA
CTGTTGGTCGCGCCATTTTAAAGCTTTATGATATTAATGAAGGGGAAATTATTTTTAATGGTGAAACCGTTTCTCATTTG
AAAGGGAAAGACTTGCGGACCTTTCGTAAGGATGCTCAGATGATTTTCCAAGATCCTCAGGCTAGTCTTAACGGCCGTAT
GAAAATCAGAGATATTGTGGCAGAAGGGCTAGATATTCATGGACTCACAGCTTCAAAGGCAGAACGAGAAGAACGCGTGC
AAGAACTCCTTGATTTGGTTGGGTTGAACAAGGACCATTTGACACGTTACCCCCATGAATTTTCTGGTGGTCAACGTCAA
CGGATTGGGATTGCCCGTGCTTTGGCAGTTAAACCTAAATTTATCATTGCTGATGAACCTATCTCAGCTCTCGATGTGTC
GATTCAGGCCCAGGTAGTTAACTTGATGCAAAAGCTTCAGCACAAACGTGGATTGACCTATCTTTTTATTGCCCATGACT
TGTCAATGGTCAAATACATTTCTGACCGTATCGGAGTCATGCACTGGGGTAAAATGTTGGAGATTGGGACCTCAGATGAT
GTCTATAATCATCCTATTCATCCTTATACCAAGAGCCTACTCTCGGCTATTCCTGAACCAGATCCAGACAAAGAACGTCA
GCGGGTGGCTGATGTATATGATCCAAGTCAAGAATTGGACGGCCAAGAACGTCAGATGCATGAGATTACGCCAGGCCATT
TTGTCTTAGCTACCCAAGAAGAAGCAGACCAATATCGACGGGAGTATCATTAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-268)

• ABC transporter (ABC_tran) (30-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	54.098	98.387	0.532
amiF	Streptococcus thermophilus LMG 18311	53.77	98.387	0.529
amiF	Streptococcus salivarius strain HSISS4	53.443	98.387	0.526