Detailed information NTG0783170

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: MGCS36089_RS09345
• Genome accession: NZ_CP117284
• Coordinates: 1897469..1898401 (-)
• Length: 310 a.a.
• NCBI ID: WP_003060110.1
• Uniprot ID: A0A9X8T5Q4
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain MGCS36089
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1892469..1903401

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MGCS36089_RS09320 (MGCS36089_03790)	tsaD	1892959..1893975 (-)	1017	WP_084916686.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-
MGCS36089_RS09325 (MGCS36089_03792)	rimI	1893965..1894390 (-)	426	WP_003056684.1	ribosomal protein S18-alanine N-acetyltransferase	-
MGCS36089_RS09330 (MGCS36089_03794)	tsaB	1894392..1895090 (-)	699	WP_065358518.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
MGCS36089_RS09335 (MGCS36089_03796)	-	1895376..1895606 (+)	231	WP_003056704.1	DNA-dependent RNA polymerase subunit epsilon	-
MGCS36089_RS09340 (MGCS36089_03798)	rnjA	1895608..1897290 (+)	1683	WP_003056700.1	ribonuclease J1	-
MGCS36089_RS09345 (MGCS36089_03800)	amiF	1897469..1898401 (-)	933	WP_003060110.1	ABC transporter ATP-binding protein	Regulator
MGCS36089_RS09350 (MGCS36089_03802)	oppD	1898394..1899446 (-)	1053	WP_012767556.1	ABC transporter ATP-binding protein	Regulator
MGCS36089_RS09355 (MGCS36089_03804)	-	1899458..1900489 (-)	1032	WP_065957283.1	ABC transporter permease	-
MGCS36089_RS09360 (MGCS36089_03806)	-	1900499..1901413 (-)	915	WP_003052794.1	ABC transporter permease	-
MGCS36089_RS09365 (MGCS36089_03808)	-	1901681..1903336 (-)	1656	WP_003058031.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 310 a.a.
• Molecular weight: 35203.02 Da
• Isoelectric Point: 6.6437

>NTDB_id=783170 MGCS36089_RS09345 WP_003060110.1 1897469..1898401(-) (amiF) [Streptococcus dysgalactiae subsp. equisimilis strain MGCS36089]
MNDNRKKLVELKNVSLTFNKGKKNEVKAIDNVSFDIYEGEVFGLVGESGSGKTTVGRAILKLYDINEGEIIFNGETVSHL
KGKDLRTFRKDAQMIFQDPQASLNGRMKIRDIVAEGLDIHGLTASKAEREERVQELLDLVGLNKDHLTRYPHEFSGGQRQ
RIGIARALAVKPKFIIADEPISALDVSIQAQVVNLMQKLQHKRGLTYLFIAHDLSMVKYISDRIGVMHWGKMLEIGTSDD
VYNHPIHPYTKSLLSAIPEPDPDKERQRVADVYDPSQELDGQERQMHEITPGHFVLATQEEADQYRREYH

Nucleotide

• Length: 933 bp

>NTDB_id=783170 MGCS36089_RS09345 WP_003060110.1 1897469..1898401(-) (amiF) [Streptococcus dysgalactiae subsp. equisimilis strain MGCS36089]
ATGAATGATAATCGAAAGAAATTAGTAGAGTTAAAAAATGTCTCCTTAACTTTCAATAAGGGAAAGAAAAACGAAGTCAA
AGCCATTGATAATGTGAGCTTTGATATTTATGAAGGGGAAGTGTTTGGACTGGTTGGGGAATCCGGATCAGGAAAAACAA
CTGTTGGTCGCGCCATTTTAAAGCTTTATGATATTAATGAAGGGGAAATTATTTTTAATGGTGAAACCGTTTCTCATTTG
AAAGGGAAAGACTTGCGGACCTTTCGTAAGGATGCTCAGATGATTTTCCAAGATCCTCAGGCTAGTCTTAACGGCCGTAT
GAAAATCAGAGATATTGTGGCAGAAGGGCTAGATATTCATGGACTCACAGCTTCAAAGGCAGAACGAGAAGAACGCGTGC
AAGAACTCCTTGATTTGGTTGGGTTGAACAAGGACCATTTGACACGTTACCCCCATGAATTTTCTGGTGGTCAACGTCAA
CGGATTGGGATTGCCCGTGCTTTGGCAGTTAAACCTAAATTTATCATTGCTGATGAACCTATCTCAGCTCTCGATGTGTC
GATTCAGGCCCAGGTAGTTAACTTGATGCAAAAGCTTCAGCACAAACGTGGATTGACCTATCTTTTTATTGCCCATGACT
TGTCAATGGTCAAATACATTTCTGACCGTATCGGAGTCATGCACTGGGGTAAAATGTTGGAGATTGGGACCTCAGATGAT
GTCTATAATCATCCTATTCATCCTTATACCAAGAGCCTACTCTCGGCTATTCCTGAACCAGATCCAGACAAAGAACGTCA
GCGGGTGGCTGATGTATATGATCCAAGTCAAGAATTGGACGGCCAAGAACGTCAGATGCATGAGATTACGCCAGGCCATT
TTGTCTTAGCTACCCAAGAAGAAGCAGACCAATATCGACGGGAGTATCATTAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-268)

• ABC transporter (ABC_tran) (30-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	54.098	98.387	0.532
amiF	Streptococcus thermophilus LMG 18311	53.77	98.387	0.529
amiF	Streptococcus salivarius strain HSISS4	53.443	98.387	0.526