Detailed information NTG0782916

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: PQQ29_RS07740
• Genome accession: NZ_CP117229
• Coordinates: 1439074..1441470 (-)
• Length: 798 a.a.
• NCBI ID: WP_187984122.1
• Uniprot ID: -
• Organism: Listeria innocua strain ATCC 33090
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1434074..1446470

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PQQ29_RS07720 (PQQ29_07720)	-	1434548..1435243 (-)	696	WP_010991584.1	ABC transporter ATP-binding protein	-
PQQ29_RS07725 (PQQ29_07725)	-	1435252..1436754 (-)	1503	WP_187984121.1	ABC transporter permease	-
PQQ29_RS07730 (PQQ29_07730)	pieR	1436922..1437608 (+)	687	WP_003762357.1	two component system response regulator PieR	-
PQQ29_RS07735 (PQQ29_07735)	pieS	1437605..1439044 (+)	1440	WP_003771912.1	two component system sensor histidine kinase PieS	-
PQQ29_RS07740 (PQQ29_07740)	recD2	1439074..1441470 (-)	2397	WP_187984122.1	ATP-dependent RecD-like DNA helicase	Machinery gene
PQQ29_RS07745 (PQQ29_07745)	-	1441496..1442134 (-)	639	WP_010991587.1	tetratricopeptide repeat protein	-
PQQ29_RS07750 (PQQ29_07750)	-	1442178..1442918 (-)	741	WP_003766975.1	alpha/beta hydrolase	-
PQQ29_RS07755 (PQQ29_07755)	mnmA	1443036..1444151 (-)	1116	WP_010991588.1	tRNA 2-thiouridine(34) synthase MnmA	-
PQQ29_RS07760 (PQQ29_07760)	-	1444170..1445318 (-)	1149	WP_003762369.1	cysteine desulfurase family protein	-

Sequence

Protein

• Length: 798 a.a.
• Molecular weight: 90152.38 Da
• Isoelectric Point: 4.8394

>NTDB_id=782916 PQQ29_RS07740 WP_187984122.1 1439074..1441470(-) (recD2) [Listeria innocua strain ATCC 33090]
MAEQESLALFNDTPEELFMKGTMLSTIFYNAENLFSVVRILVKETNAIWDEKDIIVTGFFPALHEQEVYTFYGKMQEHAK
FGQQFKADRFRKEMPQSRAGLINYLSGELFKGIGKVTAENIVDTIGDDAITKILSDPSLLNTVPKLPSGTAESLLASLRE
NQGLEHVMVGLNEYGFGPQLSMKIFQVYKQNAIEVLENNPYKLIEDVKGIGFQRADELGRKLGLGGNHPERLRAGILFML
DSVCMQQGHVYMEQEVLLGEVTYLLEESEGIRIDQAILLQQIEKLAEEQKIITENTRVYMPSLYYSESGFAYHVKRMLKQ
TEYQEQFPQSEFLLALGELEERIGVHYGESQRAALEQALMSPMLVLTGGPGTGKTTVIKGIVELYAELNGVSLDPHAYKD
GATFPVLLAAPTGRAAKRMSESTGLPAMTIHRLLGMNGQEQMDDDAERLIDGRLLIVDEMSMVDIWLANQLFRALPAHMQ
VVLVGDQDQLPSVGPGQVLKDILQSEQFPTVALSDIYRQKDGSSIIEMAHYIKEGMLPADFAKNSADRSFFHCTVNQIGD
VVEQVVKNAKNKGFRAKDIQVLAPMYRGPAGIDILNKKLQEIFNPNDTGRRKEVQFGEIKYRVHDKVLQLINQPEKNVFN
GDIGEIVSIIYAKENTEKQDLIVVQFDQTEVSYYRQEFNQLTHAYCCSIHKAQGSEFPIVIMPIVRSYYRMLRRDLLYTG
VTRSKQFLILCGEEEAFRMGVERVDENKRNTTLSERLMSEDVMLEQMTNKRILTAENITEIDPMIGMEGITPEQFMAG

Nucleotide

• Length: 2397 bp

>NTDB_id=782916 PQQ29_RS07740 WP_187984122.1 1439074..1441470(-) (recD2) [Listeria innocua strain ATCC 33090]
ATGGCTGAACAAGAATCTCTCGCCTTATTTAATGATACCCCAGAAGAACTTTTCATGAAGGGGACGATGTTGTCTACCAT
TTTTTATAATGCCGAAAACCTCTTTTCTGTGGTAAGAATTCTAGTAAAAGAGACGAATGCGATTTGGGATGAAAAGGATA
TTATTGTAACTGGTTTTTTCCCAGCACTTCATGAACAAGAAGTGTATACTTTTTACGGAAAAATGCAGGAACATGCTAAA
TTTGGTCAGCAATTTAAAGCGGACCGGTTTCGAAAAGAAATGCCTCAATCTCGCGCTGGCTTGATTAACTATCTTTCAGG
GGAACTTTTCAAAGGGATTGGTAAAGTAACAGCGGAAAACATTGTCGATACAATTGGTGATGACGCGATTACGAAAATAC
TATCTGACCCAAGTTTACTAAATACTGTTCCTAAACTGCCTTCTGGAACAGCGGAAAGTTTGCTTGCTTCCCTTAGAGAA
AATCAAGGTTTAGAGCATGTGATGGTTGGTTTAAATGAATATGGCTTTGGCCCGCAATTATCCATGAAAATTTTTCAGGT
ATATAAACAAAATGCGATCGAAGTGCTAGAAAATAATCCTTATAAATTAATTGAAGATGTTAAAGGAATTGGTTTCCAGC
GTGCTGATGAGCTTGGACGTAAGCTTGGACTTGGCGGAAACCATCCAGAACGACTTAGAGCAGGAATTTTATTTATGCTA
GATTCCGTTTGTATGCAGCAAGGTCATGTCTATATGGAACAAGAGGTTTTGCTCGGGGAAGTAACTTATCTGCTAGAAGA
AAGTGAAGGCATTAGGATTGATCAGGCAATTTTACTGCAACAAATAGAAAAACTTGCAGAAGAACAAAAAATAATTACCG
AAAACACGCGCGTCTATATGCCGTCACTTTATTATTCAGAAAGCGGTTTTGCTTACCATGTAAAACGAATGTTAAAGCAA
ACAGAGTATCAAGAACAATTTCCGCAATCGGAGTTTTTATTAGCGCTTGGGGAACTTGAAGAGCGCATTGGCGTGCATTA
CGGGGAATCTCAACGTGCGGCATTAGAACAAGCTTTAATGTCACCGATGCTTGTTCTTACTGGAGGACCAGGAACAGGGA
AAACGACTGTTATTAAAGGAATTGTAGAATTATATGCCGAGTTAAATGGTGTTAGTCTTGATCCACATGCCTATAAAGAT
GGTGCGACTTTTCCAGTGTTACTCGCAGCTCCAACAGGTCGTGCGGCTAAACGAATGTCTGAATCCACTGGCCTTCCAGC
AATGACGATTCACCGGTTACTTGGAATGAATGGCCAAGAACAGATGGATGACGATGCAGAACGATTAATTGATGGACGTT
TGTTAATTGTGGATGAAATGTCAATGGTGGATATTTGGCTTGCGAATCAATTATTCCGCGCTTTACCTGCTCATATGCAA
GTAGTGCTCGTTGGCGACCAAGACCAGCTTCCATCTGTTGGACCTGGTCAAGTATTAAAAGATATTCTTCAATCAGAACA
ATTTCCGACGGTTGCACTTTCAGATATTTATCGGCAAAAAGATGGTTCTTCCATCATTGAAATGGCTCATTATATCAAAG
AAGGAATGCTGCCAGCTGATTTTGCGAAAAATAGTGCCGATCGGTCATTTTTCCACTGTACTGTAAATCAAATTGGTGAC
GTTGTGGAACAAGTCGTGAAAAATGCTAAAAATAAAGGTTTTCGTGCAAAGGATATTCAAGTGTTGGCTCCAATGTATCG
CGGTCCAGCTGGAATTGATATATTAAATAAAAAACTACAAGAAATCTTTAATCCAAACGATACTGGTCGACGAAAAGAAG
TACAATTTGGCGAAATCAAATACCGGGTTCACGACAAAGTGTTGCAACTAATCAACCAACCAGAAAAAAATGTTTTTAAC
GGTGACATTGGCGAAATCGTATCCATTATTTATGCCAAAGAAAATACGGAAAAACAAGATTTAATTGTCGTTCAATTTGA
CCAGACAGAGGTGTCTTATTATCGACAAGAATTTAATCAATTGACCCATGCGTATTGTTGTTCGATTCATAAAGCGCAGG
GTAGTGAATTTCCGATTGTTATAATGCCAATTGTGCGTAGTTATTACCGGATGTTACGTAGAGATTTGTTATATACTGGC
GTTACAAGAAGTAAACAATTCCTAATTCTTTGCGGAGAAGAAGAAGCTTTCCGAATGGGTGTAGAACGTGTAGATGAAAA
TAAGCGGAATACAACGCTATCGGAACGTTTAATGAGTGAAGATGTGATGCTCGAACAAATGACAAATAAACGAATATTAA
CTGCCGAAAACATTACGGAGATTGATCCGATGATTGGGATGGAAGGAATTACTCCAGAACAATTTATGGCAGGATGA

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (347-554)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (595-666)

• Helix-hairpin-helix containing domain (HHH_RecD2) (160-251)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (683-731)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	57.107	98.747	0.564