Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   PO880_RS10920 Genome accession   NZ_CP116962
Coordinates   2249054..2250727 (-) Length   557 a.a.
NCBI ID   WP_002394342.1    Uniprot ID   A0A125WAC2
Organism   Enterococcus faecalis strain DM86     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2244054..2255727
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PO880_RS10890 (PO880_10890) ftsL 2245070..2245477 (-) 408 WP_002358883.1 cell division protein FtsL -
  PO880_RS10895 (PO880_10895) rsmH 2245494..2246450 (-) 957 WP_010710705.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -
  PO880_RS10900 (PO880_10900) mraZ 2246465..2246950 (-) 486 WP_025191873.1 division/cell wall cluster transcriptional repressor MraZ -
  PO880_RS10905 (PO880_10905) - 2247183..2247575 (-) 393 WP_002383401.1 DUF3397 domain-containing protein -
  PO880_RS10910 (PO880_10910) - 2247820..2248785 (+) 966 WP_002402987.1 magnesium transporter CorA family protein -
  PO880_RS10915 (PO880_10915) - 2248853..2248963 (+) 111 WP_002383399.1 DUF4044 domain-containing protein -
  PO880_RS10920 (PO880_10920) recN 2249054..2250727 (-) 1674 WP_002394342.1 DNA repair protein RecN Machinery gene
  PO880_RS10925 (PO880_10925) - 2250745..2251194 (-) 450 WP_002358881.1 arginine repressor -
  PO880_RS10930 (PO880_10930) - 2251333..2252148 (-) 816 WP_002364633.1 TlyA family rRNA (cytidine-2'-O)-methyltransferase -
  PO880_RS10935 (PO880_10935) - 2252162..2253043 (-) 882 WP_002369880.1 polyprenyl synthetase family protein -
  PO880_RS10940 (PO880_10940) - 2253043..2253273 (-) 231 WP_002355878.1 exodeoxyribonuclease VII small subunit -
  PO880_RS10945 (PO880_10945) xseA 2253275..2254621 (-) 1347 WP_002355877.1 exodeoxyribonuclease VII large subunit -
  PO880_RS10950 (PO880_10950) - 2254631..2255476 (-) 846 WP_002355876.1 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase -

Sequence

Protein


Download         Length: 557 a.a.        Molecular weight: 62627.05 Da        Isoelectric Point: 4.5772

>NTDB_id=781753 PO880_RS10920 WP_002394342.1 2249054..2250727(-) (recN) [Enterococcus faecalis strain DM86]
MLQELSVKNFAIISSLQLEFQMGMTVLTGETGAGKSIIIDAMGLLTGGRGSSDYIRQGANKCTLEGLFSMPKSQELKKLL
EELGIETEEDSLVIQRDISASGKNVCRVNGRIVNITNLKRIGEYLVDIHGQNEHQELMQSERHIDMLDEFGGKKLLAVKE
KYTQAYQEYRALEAKVRKRQKNEKEFAQRMDMLHFQSDEIASAQLVAGEEEQLLEERNKLNNFQKIADALTISYAALNGE
DDSSLDKIGTSMNELASIESLDPEYKSLSDTVQNAYYLLQEASGDLSRLIDGLELDEGRLNEVENRLELIRQMKRKYGDS
IETILSYYEEITKELAEADFLEGGTGDLEALLAEKQQAAHQQALALRKERKRLAKELEQQILTELKELYLERTEFEVRFT
ELEHLQENGLDGVEFYITTNPGEPLKPLVRVASGGELSRVMLAMKTIFSQTQGITSIVFDEVDTGVSGRVAQAIADKIYQ
ISENSQVLCITHLPQVAAVADEHYFIEKEIVAGRTETSVRILSEKERVNEIARMLAGSEITKLTIEHAQELLAMAKK

Nucleotide


Download         Length: 1674 bp        

>NTDB_id=781753 PO880_RS10920 WP_002394342.1 2249054..2250727(-) (recN) [Enterococcus faecalis strain DM86]
ATGTTACAAGAACTTTCCGTGAAAAATTTTGCGATTATCTCTTCGCTACAATTAGAGTTTCAAATGGGTATGACCGTTTT
AACGGGAGAAACGGGTGCGGGGAAATCCATCATTATTGATGCAATGGGATTACTCACAGGCGGACGTGGATCCAGTGACT
ATATTCGTCAAGGAGCAAATAAATGCACCTTAGAAGGACTTTTTTCAATGCCGAAAAGTCAAGAATTAAAGAAATTATTA
GAAGAATTAGGTATTGAAACAGAAGAAGATTCTTTAGTGATTCAACGAGATATTTCCGCTTCTGGTAAAAATGTTTGCCG
TGTCAACGGACGGATTGTCAACATTACTAATTTAAAAAGAATTGGGGAATATTTAGTAGATATTCATGGCCAAAACGAAC
ATCAAGAATTGATGCAAAGTGAACGCCATATTGATATGTTAGATGAATTTGGTGGGAAAAAACTTTTAGCAGTCAAAGAA
AAATATACACAGGCGTATCAAGAGTATCGCGCACTCGAAGCCAAAGTCAGAAAGCGACAAAAAAATGAAAAAGAATTTGC
CCAAAGAATGGACATGCTTCATTTTCAAAGTGATGAAATTGCTAGTGCACAGTTAGTCGCTGGCGAAGAAGAACAATTGT
TAGAAGAACGCAATAAACTGAACAATTTTCAAAAGATTGCTGATGCACTGACGATTAGTTATGCCGCGCTAAATGGTGAA
GACGATAGTAGTTTGGATAAAATCGGAACAAGTATGAATGAACTCGCTTCGATTGAATCCCTTGATCCAGAATATAAATC
ATTGTCAGATACTGTTCAAAATGCCTACTACTTACTACAAGAAGCTAGTGGAGATCTTTCTAGGTTGATTGATGGCTTAG
AACTAGATGAAGGCCGCTTGAATGAAGTAGAAAATCGTTTGGAATTAATCCGTCAAATGAAACGTAAATATGGTGATTCG
ATCGAAACGATTTTATCTTACTATGAAGAAATTACCAAAGAGTTAGCAGAGGCTGATTTTTTGGAAGGCGGTACAGGTGA
CTTAGAAGCGTTGCTTGCAGAGAAACAACAAGCGGCTCATCAACAAGCGTTAGCTTTGCGAAAAGAACGAAAGCGCCTAG
CCAAAGAGCTCGAACAACAAATTTTAACCGAATTAAAAGAACTATATTTGGAGCGAACGGAATTTGAAGTCCGCTTTACA
GAACTTGAGCATTTACAAGAAAATGGCTTAGACGGAGTAGAATTTTATATTACTACTAACCCAGGGGAACCATTAAAACC
GTTAGTTCGGGTGGCTTCTGGCGGAGAACTTTCGCGAGTGATGTTGGCTATGAAAACAATCTTTTCTCAAACGCAAGGGA
TCACTAGTATTGTTTTTGATGAAGTGGATACAGGAGTCAGTGGCCGGGTAGCACAGGCGATTGCCGATAAAATTTATCAA
ATTTCAGAAAATTCGCAGGTGTTGTGTATCACGCACTTGCCACAAGTGGCAGCCGTTGCTGATGAACATTATTTTATTGA
AAAAGAAATTGTGGCGGGTCGGACAGAAACAAGCGTCCGAATTTTATCTGAAAAAGAGCGAGTAAACGAAATTGCACGTA
TGCTCGCAGGAAGTGAAATTACGAAATTAACCATTGAACATGCACAAGAGCTGTTGGCGATGGCGAAAAAATAG

Domains

Predicted by InterproScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(1-508)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A125WAC2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

48.691

100

0.501