Detailed information    

insolico Bioinformatically predicted

Overview

Name   ctsG   Type   Machinery gene
Locus tag   OT343_RS06910 Genome accession   NZ_CP116955
Coordinates   1335773..1336288 (-) Length   171 a.a.
NCBI ID   WP_043012922.1    Uniprot ID   A0A5T1ZA66
Organism   Campylobacter sp. CFSAN122719     
Function   type II secretion system/type IV pilin; DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1330773..1341288
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OT343_RS06895 (OT343_06890) - 1330882..1332699 (-) 1818 WP_406606527.1 6-hydroxymethylpterin diphosphokinase MptE-like protein -
  OT343_RS06900 (OT343_06895) - 1332696..1334519 (-) 1824 WP_406606528.1 6-hydroxymethylpterin diphosphokinase MptE-like protein -
  OT343_RS06905 (OT343_06900) - 1334529..1335773 (-) 1245 WP_406606529.1 DUF2920 family protein -
  OT343_RS06910 (OT343_06905) ctsG 1335773..1336288 (-) 516 WP_043012922.1 type II secretion system protein Machinery gene
  OT343_RS06915 (OT343_06910) tsaD 1336289..1337296 (-) 1008 WP_002886115.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD -
  OT343_RS06920 (OT343_06915) - 1337293..1338687 (-) 1395 WP_002909663.1 M99 family carboxypeptidase catalytic domain-containing protein -
  OT343_RS06925 (OT343_06920) dxr 1338689..1339759 (-) 1071 WP_002860792.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  OT343_RS06930 (OT343_06925) - 1339756..1340481 (-) 726 WP_406606530.1 phosphatidate cytidylyltransferase -
  OT343_RS06935 (OT343_06930) - 1340490..1340828 (-) 339 WP_002852397.1 hypothetical protein -

Sequence

Protein


Download         Length: 171 a.a.        Molecular weight: 18762.64 Da        Isoelectric Point: 7.2441

>NTDB_id=781593 OT343_RS06910 WP_043012922.1 1335773..1336288(-) (ctsG) [Campylobacter sp. CFSAN122719]
MRKAFTILELVFVIVILGILAAIALPKMSSSKHEAEVSKSLNNLKTLINDISIYTLKNDHLSSIKTMSNVSGVENVDLSN
FNGIKEVNFRVGDDKECLKLVFINKADFILMGISSNEASKNAIINAANQSHEDLENIDFTSSSSNKACVILSKNENFKNL
ASKTYFLIGGM

Nucleotide


Download         Length: 516 bp        

>NTDB_id=781593 OT343_RS06910 WP_043012922.1 1335773..1336288(-) (ctsG) [Campylobacter sp. CFSAN122719]
ATGAGAAAAGCTTTTACTATATTAGAACTTGTTTTTGTGATTGTTATCTTAGGAATTTTAGCCGCTATTGCTTTACCAAA
AATGAGTTCAAGTAAGCATGAAGCCGAGGTTAGTAAGTCTTTAAATAACCTTAAAACTTTGATCAACGATATAAGCATTT
ATACTTTGAAAAATGATCATTTAAGCTCTATAAAAACGATGAGTAATGTAAGCGGGGTTGAAAATGTTGATCTTAGTAAT
TTTAACGGTATAAAAGAAGTAAATTTTCGCGTAGGCGATGATAAAGAATGCTTAAAACTTGTTTTTATAAATAAAGCTGA
TTTTATACTCATGGGAATTTCAAGCAATGAAGCAAGTAAAAATGCTATCATCAACGCAGCTAATCAAAGCCATGAAGATT
TAGAAAATATAGACTTTACAAGCTCTTCTAGTAATAAAGCTTGTGTGATTTTAAGTAAGAATGAAAATTTTAAAAACCTA
GCGAGTAAAACTTATTTTTTAATAGGGGGAATGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5T1ZA66

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ctsG Campylobacter jejuni subsp. jejuni 81-176

93.567

100

0.936