Detailed information    

insolico Bioinformatically predicted

Overview

Name   ctsG   Type   Machinery gene
Locus tag   OT390_RS06810 Genome accession   NZ_CP116953
Coordinates   1305482..1305997 (-) Length   171 a.a.
NCBI ID   WP_002875272.1    Uniprot ID   A0A5T0KSE7
Organism   Campylobacter sp. CFSAN122748     
Function   type II secretion system/type IV pilin; DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1300482..1310997
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OT390_RS06795 (OT390_06780) - 1300597..1302411 (-) 1815 WP_167843207.1 motility associated factor glycosyltransferase family protein -
  OT390_RS06800 (OT390_06785) - 1302408..1304231 (-) 1824 WP_061099841.1 motility associated factor glycosyltransferase family protein -
  OT390_RS06805 (OT390_06790) - 1304241..1305482 (-) 1242 WP_032586798.1 DUF2920 family protein -
  OT390_RS06810 (OT390_06795) ctsG 1305482..1305997 (-) 516 WP_002875272.1 type II secretion system protein Machinery gene
  OT390_RS06815 (OT390_06800) tsaD 1305998..1307005 (-) 1008 WP_032583832.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD -
  OT390_RS06820 (OT390_06805) - 1307002..1308396 (-) 1395 WP_002898668.1 M99 family carboxypeptidase catalytic domain-containing protein -
  OT390_RS06825 (OT390_06810) dxr 1308398..1309468 (-) 1071 WP_002898669.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  OT390_RS06830 (OT390_06815) - 1309465..1310190 (-) 726 WP_002888102.1 phosphatidate cytidylyltransferase -
  OT390_RS06835 (OT390_06820) - 1310199..1310537 (-) 339 WP_002852397.1 hypothetical protein -

Sequence

Protein


Download         Length: 171 a.a.        Molecular weight: 18650.51 Da        Isoelectric Point: 6.4682

>NTDB_id=781566 OT390_RS06810 WP_002875272.1 1305482..1305997(-) (ctsG) [Campylobacter sp. CFSAN122748]
MKKAFTILELVFVIVILGILAAIALPKMSSSKDEAEVSKSLNNLKTLINDISIYTLKNDHLSSIKTMSNVSGVENVDLGN
FNGTKEVNFRVGDDKECLKLLFINKADFILMGISSNEASKNAIINAANQSHEDLENIDFTSSSSNKACVILSKNENFKNL
ASKTYLLIGGM

Nucleotide


Download         Length: 516 bp        

>NTDB_id=781566 OT390_RS06810 WP_002875272.1 1305482..1305997(-) (ctsG) [Campylobacter sp. CFSAN122748]
ATGAAAAAAGCTTTTACCATATTAGAACTTGTTTTTGTGATTGTTATTTTAGGAATTTTAGCCGCTATTGCTTTACCAAA
AATGAGTTCAAGCAAGGATGAAGCTGAAGTTAGTAAGTCTTTAAATAACCTTAAAACTTTGATTAATGATATAAGCATTT
ATACTTTAAAAAATGATCATTTAAGCTCTATAAAAACGATGAGTAATGTAAGTGGGGTTGAAAATGTCGATCTTGGCAAT
TTTAATGGCACAAAAGAAGTAAATTTTCGCGTAGGCGATGATAAAGAATGCTTAAAACTTCTTTTTATAAATAAAGCTGA
TTTTATACTCATGGGAATTTCAAGCAATGAAGCAAGTAAAAATGCTATCATTAACGCAGCCAATCAAAGTCATGAAGATT
TAGAAAATATAGACTTTACAAGCTCTTCTAGTAATAAAGCTTGTGTGATCTTAAGTAAGAATGAAAATTTTAAAAACCTA
GCGAGTAAAACTTATCTTTTAATAGGGGGAATGTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5T0KSE7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ctsG Campylobacter jejuni subsp. jejuni 81-176

93.567

100

0.936