Detailed information
Bioinformatically predicted
Overview
| Name | codY | Type | Regulator |
| Locus tag | PP186_RS08565 | Genome accession | NZ_CP116895 |
| Coordinates | 1586585..1587364 (+) | Length | 259 a.a. |
| NCBI ID | WP_000421288.1 | Uniprot ID | Q81WK7 |
| Organism | Bacillus anthracis strain AN17-14_S4 | ||
| Function | repression of comK (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 1547762..1621686 | 1586585..1587364 | within | 0 |
Gene organization within MGE regions
Location: 1547762..1621686
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PP186_RS08375 (PP186_08375) | rsmB | 1547920..1549254 (+) | 1335 | WP_001249680.1 | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | - |
| PP186_RS08380 (PP186_08380) | rlmN | 1549259..1550347 (+) | 1089 | WP_000450543.1 | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | - |
| PP186_RS08385 (PP186_08385) | - | 1550352..1551104 (+) | 753 | WP_000648699.1 | Stp1/IreP family PP2C-type Ser/Thr phosphatase | - |
| PP186_RS08390 (PP186_08390) | prkC | 1551113..1553086 (+) | 1974 | WP_000904759.1 | serine/threonine protein kinase PrkC | - |
| PP186_RS08395 (PP186_08395) | rsgA | 1553355..1554236 (+) | 882 | WP_001113935.1 | ribosome small subunit-dependent GTPase A | - |
| PP186_RS08400 (PP186_08400) | rpe | 1554239..1554883 (+) | 645 | WP_000589966.1 | ribulose-phosphate 3-epimerase | - |
| PP186_RS08405 (PP186_08405) | - | 1554983..1555663 (+) | 681 | WP_025388434.1 | thiamine diphosphokinase | - |
| PP186_RS08410 (PP186_08410) | spoVM | 1555730..1555810 (+) | 81 | WP_001213599.1 | stage V sporulation protein SpoVM | - |
| PP186_RS08415 (PP186_08415) | rpmB | 1555883..1556071 (-) | 189 | WP_000124778.1 | 50S ribosomal protein L28 | - |
| PP186_RS08420 (PP186_08420) | - | 1556450..1556812 (+) | 363 | WP_000021109.1 | Asp23/Gls24 family envelope stress response protein | - |
| PP186_RS08425 (PP186_08425) | - | 1556835..1558511 (+) | 1677 | WP_000027136.1 | DAK2 domain-containing protein | - |
| PP186_RS08430 (PP186_08430) | recG | 1558801..1560849 (+) | 2049 | WP_001006884.1 | ATP-dependent DNA helicase RecG | - |
| PP186_RS08435 (PP186_08435) | fapR | 1560938..1561531 (+) | 594 | WP_000747352.1 | transcription factor FapR | - |
| PP186_RS08440 (PP186_08440) | plsX | 1561528..1562520 (+) | 993 | WP_000684111.1 | phosphate acyltransferase PlsX | - |
| PP186_RS08445 (PP186_08445) | fabD | 1562535..1563479 (+) | 945 | WP_033646952.1 | ACP S-malonyltransferase | - |
| PP186_RS08450 (PP186_08450) | fabG | 1563479..1564219 (+) | 741 | WP_000911782.1 | 3-oxoacyl-[acyl-carrier-protein] reductase | - |
| PP186_RS08455 (PP186_08455) | acpP | 1564289..1564522 (+) | 234 | WP_000786062.1 | acyl carrier protein | - |
| PP186_RS08460 (PP186_08460) | rncS | 1564581..1565318 (+) | 738 | WP_001146873.1 | ribonuclease III | - |
| PP186_RS08465 (PP186_08465) | smc | 1565465..1569034 (+) | 3570 | WP_000478985.1 | chromosome segregation protein SMC | - |
| PP186_RS08470 (PP186_08470) | ftsY | 1569050..1570039 (+) | 990 | WP_000007650.1 | signal recognition particle-docking protein FtsY | - |
| PP186_RS08475 (PP186_08475) | - | 1570173..1570505 (+) | 333 | WP_000891062.1 | putative DNA-binding protein | - |
| PP186_RS08480 (PP186_08480) | ffh | 1570518..1571867 (+) | 1350 | WP_000863456.1 | signal recognition particle protein | - |
| PP186_RS08485 (PP186_08485) | rpsP | 1571968..1572240 (+) | 273 | WP_000268750.1 | 30S ribosomal protein S16 | - |
| PP186_RS08490 (PP186_08490) | - | 1572255..1572482 (+) | 228 | WP_000737398.1 | KH domain-containing protein | - |
| PP186_RS08495 (PP186_08495) | rimM | 1572603..1573118 (+) | 516 | WP_000170269.1 | ribosome maturation factor RimM | - |
| PP186_RS08500 (PP186_08500) | trmD | 1573118..1573852 (+) | 735 | WP_000686892.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| PP186_RS08505 (PP186_08505) | rplS | 1573999..1574343 (+) | 345 | WP_001186516.1 | 50S ribosomal protein L19 | - |
| PP186_RS08510 (PP186_08510) | lepB | 1574445..1574996 (+) | 552 | WP_000711857.1 | signal peptidase I | - |
| PP186_RS08515 (PP186_08515) | ylqF | 1575017..1575907 (+) | 891 | WP_000236707.1 | ribosome biogenesis GTPase YlqF | - |
| PP186_RS08520 (PP186_08520) | rnhB | 1575959..1576732 (+) | 774 | WP_001174712.1 | ribonuclease HII | - |
| PP186_RS08525 (PP186_08525) | sucC | 1576926..1578086 (+) | 1161 | WP_001020786.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| PP186_RS08530 (PP186_08530) | sucD | 1578107..1579009 (+) | 903 | WP_000115178.1 | succinate--CoA ligase subunit alpha | - |
| PP186_RS08535 (PP186_08535) | dprA | 1579097..1579965 (+) | 869 | Protein_1673 | DNA-processing protein DprA | - |
| PP186_RS08540 (PP186_08540) | topA | 1580110..1582188 (+) | 2079 | WP_001286969.1 | type I DNA topoisomerase | - |
| PP186_RS08545 (PP186_08545) | trmFO | 1582239..1583543 (+) | 1305 | WP_003161605.1 | FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO | - |
| PP186_RS08550 (PP186_08550) | xerC | 1583609..1584508 (+) | 900 | WP_001101226.1 | tyrosine recombinase XerC | - |
| PP186_RS08555 (PP186_08555) | hslV | 1584551..1585093 (+) | 543 | WP_000526272.1 | ATP-dependent protease proteolytic subunit HslV | - |
| PP186_RS08560 (PP186_08560) | hslU | 1585116..1586507 (+) | 1392 | WP_000550088.1 | ATP-dependent protease ATPase subunit HslU | - |
| PP186_RS08565 (PP186_08565) | codY | 1586585..1587364 (+) | 780 | WP_000421288.1 | GTP-sensing pleiotropic transcriptional regulator CodY | Regulator |
| PP186_RS08570 (PP186_08570) | rpsB | 1587714..1588415 (+) | 702 | WP_000111483.1 | 30S ribosomal protein S2 | - |
| PP186_RS08575 (PP186_08575) | tsf | 1588519..1589406 (+) | 888 | WP_001018581.1 | translation elongation factor Ts | - |
| PP186_RS08580 (PP186_08580) | pyrH | 1589473..1590195 (+) | 723 | WP_000042663.1 | UMP kinase | - |
| PP186_RS08585 (PP186_08585) | frr | 1590198..1590755 (+) | 558 | WP_000531503.1 | ribosome recycling factor | - |
| PP186_RS08590 (PP186_08590) | uppS | 1590841..1591617 (+) | 777 | WP_000971303.1 | isoprenyl transferase | - |
| PP186_RS08595 (PP186_08595) | cdsA | 1591635..1592426 (+) | 792 | WP_000813581.1 | phosphatidate cytidylyltransferase | - |
| PP186_RS08600 (PP186_08600) | dxr | 1592450..1593592 (+) | 1143 | WP_000790359.1 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase | - |
| PP186_RS08605 (PP186_08605) | rseP | 1593609..1594865 (+) | 1257 | WP_001090228.1 | RIP metalloprotease RseP | - |
| PP186_RS08610 (PP186_08610) | - | 1594975..1596675 (+) | 1701 | WP_000814312.1 | proline--tRNA ligase | - |
| PP186_RS08615 (PP186_08615) | - | 1596800..1601101 (+) | 4302 | WP_000059985.1 | PolC-type DNA polymerase III | - |
| PP186_RS08620 (PP186_08620) | rimP | 1601434..1601904 (+) | 471 | WP_000359097.1 | ribosome maturation factor RimP | - |
| PP186_RS08625 (PP186_08625) | nusA | 1601922..1603028 (+) | 1107 | WP_000102609.1 | transcription termination factor NusA | - |
| PP186_RS08630 (PP186_08630) | - | 1603040..1603312 (+) | 273 | WP_000071128.1 | YlxR family protein | - |
| PP186_RS08635 (PP186_08635) | - | 1603313..1603624 (+) | 312 | WP_001286523.1 | YlxQ family RNA-binding protein | - |
| PP186_RS08640 (PP186_08640) | infB | 1603629..1605689 (+) | 2061 | WP_000036339.1 | translation initiation factor IF-2 | - |
| PP186_RS08645 (PP186_08645) | - | 1605686..1605967 (+) | 282 | WP_000582364.1 | DUF503 family protein | - |
| PP186_RS08650 (PP186_08650) | rbfA | 1605983..1606339 (+) | 357 | WP_000776446.1 | 30S ribosome-binding factor RbfA | - |
| PP186_RS08655 (PP186_08655) | truB | 1606426..1607349 (+) | 924 | WP_000399357.1 | tRNA pseudouridine(55) synthase TruB | - |
| PP186_RS08660 (PP186_08660) | ribF | 1607393..1608364 (+) | 972 | WP_000766711.1 | bifunctional riboflavin kinase/FAD synthetase | - |
| PP186_RS08665 (PP186_08665) | rpsO | 1608465..1608734 (+) | 270 | WP_001229392.1 | 30S ribosomal protein S15 | - |
| PP186_RS08670 (PP186_08670) | pnp | 1608895..1611033 (+) | 2139 | WP_000076750.1 | polyribonucleotide nucleotidyltransferase | - |
| PP186_RS08675 (PP186_08675) | - | 1611185..1612084 (+) | 900 | WP_000647529.1 | polysaccharide deacetylase family protein | - |
| PP186_RS08680 (PP186_08680) | - | 1612171..1613412 (+) | 1242 | WP_000592993.1 | pitrilysin family protein | - |
| PP186_RS08685 (PP186_08685) | - | 1613539..1613790 (+) | 252 | WP_001239752.1 | YlmC/YmxH family sporulation protein | - |
| PP186_RS08690 (PP186_08690) | dpaA | 1614065..1614967 (+) | 903 | WP_000954726.1 | dipicolinic acid synthetase subunit A | - |
| PP186_RS08695 (PP186_08695) | dpaB | 1614964..1615563 (+) | 600 | WP_001049484.1 | dipicolinate synthase subunit B | - |
| PP186_RS08700 (PP186_08700) | asd | 1615714..1616760 (+) | 1047 | WP_000414849.1 | aspartate-semialdehyde dehydrogenase | - |
| PP186_RS08705 (PP186_08705) | dapG | 1616784..1618016 (+) | 1233 | WP_000692470.1 | aspartate kinase | - |
| PP186_RS08710 (PP186_08710) | dapA | 1618028..1618906 (+) | 879 | WP_000564761.1 | 4-hydroxy-tetrahydrodipicolinate synthase | - |
| PP186_RS08715 (PP186_08715) | - | 1619672..1621342 (+) | 1671 | WP_000823085.1 | ribonuclease J | - |
Sequence
Protein
Download Length: 259 a.a. Molecular weight: 28774.05 Da Isoelectric Point: 4.7947
>NTDB_id=780926 PP186_RS08565 WP_000421288.1 1586585..1587364(+) (codY) [Bacillus anthracis strain AN17-14_S4]
MELLAKTRKLNALLQSAAGKPVNFREMSDTMCEVIEANVFVVSRRGKLLGYAIHQQIENERMKQMLAERQFPEEYTQSLF
NITETSSNLDVNSAYTAFPVENKELFGQGLTTIVPIVGGGERLGTLVLARLGQEFLDDDLILAEYSSTVVGMEILREKAE
EIEEEARSKAVVQMAISSLSYSELEAIEHIFEELNGTEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT
YIKVLNDKFLHELAKLKTN
MELLAKTRKLNALLQSAAGKPVNFREMSDTMCEVIEANVFVVSRRGKLLGYAIHQQIENERMKQMLAERQFPEEYTQSLF
NITETSSNLDVNSAYTAFPVENKELFGQGLTTIVPIVGGGERLGTLVLARLGQEFLDDDLILAEYSSTVVGMEILREKAE
EIEEEARSKAVVQMAISSLSYSELEAIEHIFEELNGTEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT
YIKVLNDKFLHELAKLKTN
Nucleotide
Download Length: 780 bp
>NTDB_id=780926 PP186_RS08565 WP_000421288.1 1586585..1587364(+) (codY) [Bacillus anthracis strain AN17-14_S4]
ATGGAATTATTAGCAAAAACAAGAAAATTAAATGCGTTATTACAGAGCGCAGCAGGAAAGCCTGTAAACTTTAGAGAAAT
GTCTGACACAATGTGTGAAGTAATCGAAGCGAACGTATTCGTAGTAAGTCGTCGTGGTAAATTACTAGGTTATGCAATTC
ACCAACAAATCGAGAATGAGCGTATGAAACAAATGCTTGCAGAACGTCAATTCCCAGAAGAGTATACACAAAGCTTATTC
AACATTACAGAAACATCTTCAAACTTAGATGTAAACAGTGCTTACACAGCATTCCCAGTAGAAAATAAAGAATTATTTGG
TCAAGGTTTAACTACAATCGTACCGATCGTTGGTGGCGGTGAGCGTCTAGGTACATTAGTTTTAGCTCGTCTTGGTCAAG
AGTTCTTAGATGATGATTTAATTCTTGCTGAGTACAGCTCAACTGTTGTAGGTATGGAAATTTTACGTGAAAAAGCAGAA
GAAATCGAAGAAGAAGCACGTAGCAAAGCTGTTGTTCAAATGGCGATCAGCTCATTATCTTACAGTGAATTAGAAGCAAT
CGAGCACATCTTCGAAGAATTAAACGGAACAGAAGGTTTACTTGTTGCAAGTAAAATTGCTGACCGCGTAGGAATCACTC
GTTCGGTAATCGTAAATGCACTTCGTAAATTAGAAAGTGCTGGTGTAATTGAGTCGCGTTCTTTAGGTATGAAAGGAACA
TACATTAAAGTATTAAACGACAAATTCTTACATGAACTTGCTAAATTAAAAACAAACTAA
ATGGAATTATTAGCAAAAACAAGAAAATTAAATGCGTTATTACAGAGCGCAGCAGGAAAGCCTGTAAACTTTAGAGAAAT
GTCTGACACAATGTGTGAAGTAATCGAAGCGAACGTATTCGTAGTAAGTCGTCGTGGTAAATTACTAGGTTATGCAATTC
ACCAACAAATCGAGAATGAGCGTATGAAACAAATGCTTGCAGAACGTCAATTCCCAGAAGAGTATACACAAAGCTTATTC
AACATTACAGAAACATCTTCAAACTTAGATGTAAACAGTGCTTACACAGCATTCCCAGTAGAAAATAAAGAATTATTTGG
TCAAGGTTTAACTACAATCGTACCGATCGTTGGTGGCGGTGAGCGTCTAGGTACATTAGTTTTAGCTCGTCTTGGTCAAG
AGTTCTTAGATGATGATTTAATTCTTGCTGAGTACAGCTCAACTGTTGTAGGTATGGAAATTTTACGTGAAAAAGCAGAA
GAAATCGAAGAAGAAGCACGTAGCAAAGCTGTTGTTCAAATGGCGATCAGCTCATTATCTTACAGTGAATTAGAAGCAAT
CGAGCACATCTTCGAAGAATTAAACGGAACAGAAGGTTTACTTGTTGCAAGTAAAATTGCTGACCGCGTAGGAATCACTC
GTTCGGTAATCGTAAATGCACTTCGTAAATTAGAAAGTGCTGGTGTAATTGAGTCGCGTTCTTTAGGTATGAAAGGAACA
TACATTAAAGTATTAAACGACAAATTCTTACATGAACTTGCTAAATTAAAAACAAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| codY | Bacillus subtilis subsp. subtilis str. 168 |
81.081 |
100 |
0.811 |
| codY | Lactococcus lactis subsp. lactis strain DGCC12653 |
46.667 |
98.456 |
0.459 |