Detailed information NTG0780172

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: PNF30_RS06755
• Genome accession: NZ_CP116774
• Coordinates: 1332407..1334791 (+)
• Length: 794 a.a.
• NCBI ID: WP_144471228.1
• Uniprot ID: -
• Organism: Bacillus safensis strain SRCM125915
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1327407..1339791

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PNF30_RS06735 (PNF30_06735)	cymR	1328880..1329299 (+)	420	WP_024423125.1	cysteine metabolism transcriptional regulator CymR	-
PNF30_RS06740 (PNF30_06740)	-	1329318..1330460 (+)	1143	WP_144471234.1	cysteine desulfurase family protein	-
PNF30_RS06745 (PNF30_06745)	mnmA	1330555..1331673 (+)	1119	WP_095409173.1	tRNA 2-thiouridine(34) synthase MnmA	-
PNF30_RS06750 (PNF30_06750)	-	1331734..1332387 (+)	654	WP_025092425.1	tetratricopeptide repeat protein	-
PNF30_RS06755 (PNF30_06755)	recD2	1332407..1334791 (+)	2385	WP_144471228.1	ATP-dependent RecD-like DNA helicase	Machinery gene
PNF30_RS06760 (PNF30_06760)	-	1334865..1335383 (+)	519	WP_095409171.1	PRC-barrel domain-containing protein	-
PNF30_RS06765 (PNF30_06765)	-	1335397..1335588 (+)	192	WP_003216308.1	hypothetical protein	-
PNF30_RS06770 (PNF30_06770)	-	1335609..1335740 (+)	132	WP_003216198.1	YrzQ family protein	-
PNF30_RS06775 (PNF30_06775)	-	1335820..1336470 (-)	651	WP_024427867.1	amino acid ABC transporter permease	-
PNF30_RS06780 (PNF30_06780)	-	1336486..1337139 (-)	654	WP_144471224.1	amino acid ABC transporter permease	-
PNF30_RS06785 (PNF30_06785)	-	1337217..1338026 (-)	810	WP_095409168.1	transporter substrate-binding domain-containing protein	-
PNF30_RS06790 (PNF30_06790)	-	1338040..1338768 (-)	729	WP_048238982.1	amino acid ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 794 a.a.
• Molecular weight: 89045.58 Da
• Isoelectric Point: 5.2615

>NTDB_id=780172 PNF30_RS06755 WP_144471228.1 1332407..1334791(+) (recD2) [Bacillus safensis strain SRCM125915]
MQEHPDQMKLEDEPFLKGTIQAVIFHNESNLYSVLKVKVIETSENLEEKTASVTGYFPALHEEETYTFYGKVTSHPKFGE
QFQATHFQKEVPTTKQGIIHYLSSDLFEGIGKKTAEEIVGQLGSQTLHKIMRDPAVLYDVPRLSKKKADKLAAALQEHQG
LEQIMISLNQYGFGPQLSMKIYQVYESETLQKIEENPYQLVKDVEGIGFIKADELGARTGISGNDPERIRAALLYTVETA
SLQDGHTYIQTKDLIVETRKLLNQTGNDYKVTEMDVANQIIALGEGKEMIIEDDRCYHPSLFYAEQSVAKRIQKIVSQTE
YADQFPESEFLLALGELEERLGVQYAPTQKEAIQKALMSPMLLLTGGPGTGKTTVIKGIVELYSDLHGVSLDPSDYKKDE
SFPFVLAAPTGRAAKRMTESTGLPAVTIHRLLGWNGSEGFSHDEEQPIEGKLVIIDESSMLDIWLANHLFKAIPDHIQVI
MVGDEHQLPSVGPGQVLRDLLASKAVPAVTLTDIYRQADGSTIVELAHDMKNGVLPKDITARSKDRSFIQCSADQMKEVI
EKVVSNAAQKGFSAKDIQVLAPMYKGKAGINELNKMLQHILNPKKPKGREIPFGDVVYRTGDKVLQLVNQPENNIFNGDI
GEIVSIFYAKENTEKEDMAVISFDGNEITFTKKDFHQFTHAYCCSIHKSQGSEFPIVVLPVVRSYYRMLRRNLLYTAITR
SKKFLILCGEESALEWGVKNNEDSLRQTSLTMRLVQTEQIMDAELEALQKQLPFSVHDANIGMEGITPFDFMHE

Nucleotide

• Length: 2385 bp

>NTDB_id=780172 PNF30_RS06755 WP_144471228.1 1332407..1334791(+) (recD2) [Bacillus safensis strain SRCM125915]
GTGCAGGAACATCCAGATCAAATGAAGCTTGAGGACGAACCGTTTTTAAAGGGGACCATTCAAGCCGTTATTTTCCATAA
TGAAAGTAATTTATACTCGGTGTTAAAGGTGAAAGTCATTGAAACATCGGAAAACTTAGAGGAAAAAACAGCATCTGTCA
CAGGCTACTTCCCAGCACTTCATGAGGAGGAAACCTACACCTTCTATGGCAAAGTCACAAGCCACCCGAAATTTGGTGAA
CAGTTTCAGGCCACTCATTTTCAAAAGGAAGTGCCGACAACGAAGCAAGGAATCATTCATTATCTCTCAAGTGATTTATT
TGAGGGGATAGGGAAAAAGACGGCTGAAGAAATCGTGGGGCAGCTTGGCAGTCAGACGCTCCATAAAATTATGCGTGACC
CAGCTGTTTTGTATGATGTTCCGCGCTTATCAAAAAAGAAGGCGGATAAGCTGGCCGCAGCGCTTCAGGAGCATCAAGGG
CTGGAACAAATTATGATCAGCCTGAATCAATATGGCTTTGGTCCACAGCTCAGTATGAAGATTTACCAAGTGTATGAAAG
TGAAACGCTGCAGAAAATCGAGGAAAATCCCTATCAGCTCGTTAAGGATGTCGAGGGGATCGGATTTATTAAGGCGGATG
AGCTTGGCGCTAGAACAGGCATCTCAGGAAATGACCCAGAGCGGATTCGTGCCGCCTTGCTATATACAGTGGAGACAGCT
AGTCTTCAGGACGGTCATACGTACATACAAACGAAAGATTTGATCGTCGAAACCCGCAAACTGCTCAACCAAACAGGCAA
TGATTACAAAGTGACTGAAATGGATGTCGCCAATCAGATCATTGCACTTGGCGAAGGAAAAGAAATGATCATTGAAGACG
ACCGCTGCTATCATCCATCCTTATTTTATGCGGAGCAAAGTGTCGCCAAACGCATTCAAAAAATCGTCTCCCAAACAGAA
TATGCAGATCAATTTCCTGAATCAGAATTTCTGCTTGCACTTGGGGAGCTGGAGGAGCGGTTAGGCGTTCAGTATGCACC
GACACAAAAGGAAGCGATTCAAAAGGCACTCATGTCCCCGATGCTGCTTTTAACAGGCGGGCCTGGAACAGGGAAGACAA
CAGTCATTAAAGGGATTGTCGAGCTTTACAGTGATCTTCACGGTGTATCTCTTGATCCGAGTGATTATAAAAAAGATGAA
TCGTTCCCATTTGTACTTGCGGCACCAACTGGACGGGCGGCTAAACGGATGACAGAATCAACAGGGCTTCCAGCTGTGAC
CATTCACCGGCTGCTAGGCTGGAACGGTTCGGAGGGCTTCTCGCATGATGAGGAACAGCCGATTGAAGGAAAGCTTGTCA
TCATTGATGAATCAAGTATGCTGGATATTTGGCTGGCGAATCATTTGTTTAAAGCGATTCCTGATCATATTCAAGTGATT
ATGGTAGGGGATGAACATCAGCTGCCTTCTGTCGGACCAGGCCAAGTTTTACGGGATTTGCTTGCCTCAAAAGCTGTGCC
GGCTGTTACCTTGACAGATATTTACCGGCAGGCAGACGGCTCAACCATTGTTGAACTTGCACATGATATGAAAAATGGTG
TGCTGCCAAAAGATATTACTGCACGCTCAAAGGATCGGTCCTTCATTCAGTGTTCAGCTGATCAAATGAAAGAAGTCATT
GAGAAAGTCGTCAGCAATGCTGCTCAAAAAGGGTTTTCAGCAAAGGACATTCAAGTACTGGCACCGATGTATAAAGGAAA
AGCAGGCATCAATGAGCTCAACAAAATGCTGCAGCACATTTTGAATCCTAAAAAACCAAAAGGCAGAGAAATCCCGTTTG
GTGATGTGGTGTACCGGACAGGTGATAAGGTGCTTCAGCTTGTGAATCAGCCGGAGAACAACATTTTTAACGGCGATATC
GGTGAAATTGTCTCGATTTTTTATGCAAAAGAAAATACAGAAAAAGAAGACATGGCCGTGATCTCCTTTGATGGAAATGA
AATCACCTTTACAAAAAAGGATTTTCATCAATTTACACACGCCTATTGCTGTTCCATTCACAAATCACAAGGCAGTGAAT
TCCCAATTGTTGTGCTGCCAGTCGTGAGAAGCTATTACCGAATGCTTCGGCGGAATTTGCTGTACACAGCCATTACACGA
AGTAAAAAGTTTTTAATTTTGTGCGGCGAGGAATCAGCGCTGGAGTGGGGCGTGAAAAACAATGAGGATTCCCTCAGACA
AACGTCCTTAACGATGCGGCTCGTGCAAACCGAACAAATCATGGATGCAGAACTTGAAGCGCTCCAAAAACAGCTTCCGT
TTAGCGTACATGACGCAAATATTGGCATGGAGGGAATCACTCCGTTTGATTTTATGCATGAGTAG

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-659)

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-248)

• AAA domain (AAA_30) (345-553)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	79.523	100	0.797