Detailed information NTG0777044

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: QWI19_RS13600
• Genome accession: NZ_CP129123
• Coordinates: 2613873..2615138 (+)
• Length: 421 a.a.
• NCBI ID: WP_004398500.1
• Uniprot ID: O34528
• Organism: Bacillus subtilis strain 6D1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2608873..2620138

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QWI19_RS13580	yrrB	2610244..2610864 (-)	621	WP_015251572.1	tetratricopeptide repeat protein	-
QWI19_RS13585	mnmA	2610950..2612065 (-)	1116	WP_014480424.1	tRNA 2-thiouridine(34) synthase MnmA	-
QWI19_RS13590	iscSA	2612093..2613235 (-)	1143	WP_003229769.1	cysteine desulfurase family protein	-
QWI19_RS13595	cymR	2613254..2613670 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
QWI19_RS13600	rarA	2613873..2615138 (+)	1266	WP_004398500.1	replication-associated recombination protein A	Machinery gene
QWI19_RS13605	tcdA	2615180..2615944 (-)	765	WP_003229763.1	ThiF family adenylyltransferase	-
QWI19_RS13615	aspS	2616280..2618058 (-)	1779	WP_015251570.1	aspartate--tRNA ligase	-
QWI19_RS13620	hisS	2618072..2619346 (-)	1275	WP_015251569.1	histidine--tRNA ligase	-
QWI19_RS13625	yrzK	2619728..2619898 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46514.38 Da
• Isoelectric Point: 7.2043

>NTDB_id=777044 QWI19_RS13600 WP_004398500.1 2613873..2615138(+) (rarA) [Bacillus subtilis strain 6D1]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPELIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=777044 QWI19_RS13600 WP_004398500.1 2613873..2615138(+) (rarA) [Bacillus subtilis strain 6D1]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGAATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGAACTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCAATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAGGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCACGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACTGGAAAGTTCGAATCTGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

3D structure

• AlphaFold DB: O34528

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	100	100	1