Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   PF977_RS01875 Genome accession   NZ_CP116012
Coordinates   366388..366507 (-) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis strain SRCM124333     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 361388..371507
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PF977_RS01845 (PF977_01845) - 362044..362604 (-) 561 WP_015714897.1 hypothetical protein -
  PF977_RS01850 (PF977_01850) - 362597..363244 (-) 648 WP_015714896.1 ABC transporter ATP-binding protein -
  PF977_RS01855 (PF977_01855) - 363247..364044 (-) 798 WP_231573542.1 hypothetical protein -
  PF977_RS01860 (PF977_01860) - 364054..364728 (-) 675 WP_015714894.1 hypothetical protein -
  PF977_RS01865 (PF977_01865) - 364715..365503 (-) 789 WP_015714893.1 membrane protein -
  PF977_RS01870 (PF977_01870) - 365652..366131 (-) 480 WP_015714892.1 hypothetical protein -
  PF977_RS01875 (PF977_01875) phrF 366388..366507 (-) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  PF977_RS01880 (PF977_01880) rapF 366491..367636 (-) 1146 WP_015714890.1 response regulator aspartate phosphatase RapF Regulator
  PF977_RS22715 - 367639..367869 (+) 231 WP_015714889.1 hypothetical protein -
  PF977_RS01885 (PF977_01885) ywhK 367866..369221 (+) 1356 WP_015250986.1 YncE family protein -
  PF977_RS01890 (PF977_01890) ywhL 369260..370636 (+) 1377 WP_015714888.1 YncE family protein -
  PF977_RS01895 (PF977_01895) albG 370642..371343 (-) 702 WP_003227556.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=775076 PF977_RS01875 WP_009968329.1 366388..366507(-) (phrF) [Bacillus subtilis strain SRCM124333]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=775076 PF977_RS01875 WP_009968329.1 366388..366507(-) (phrF) [Bacillus subtilis strain SRCM124333]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487