Detailed information NTG0774052

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: PFY12_RS10035
• Genome accession: NZ_CP115859
• Coordinates: 2188589..2189698 (-)
• Length: 369 a.a.
• NCBI ID: WP_271147791.1
• Uniprot ID: -
• Organism: Chryseobacterium camelliae strain VAN22-5A
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 2183589..2194698

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PFY12_RS10010 (PFY12_10010)	-	2183869..2184939 (+)	1071	WP_271147786.1	calcium:proton antiporter	-
PFY12_RS10015 (PFY12_10015)	-	2184950..2185330 (-)	381	WP_271147787.1	group III truncated hemoglobin	-
PFY12_RS10020 (PFY12_10020)	-	2185459..2186430 (+)	972	WP_271147788.1	ion channel	-
PFY12_RS10025 (PFY12_10025)	-	2186430..2186918 (+)	489	WP_271147789.1	YkgJ family cysteine cluster protein	-
PFY12_RS10030 (PFY12_10030)	gdhA	2187040..2188398 (-)	1359	WP_271147790.1	NADP-specific glutamate dehydrogenase	-
PFY12_RS10035 (PFY12_10035)	dprA	2188589..2189698 (-)	1110	WP_271147791.1	DNA-processing protein DprA	Machinery gene
PFY12_RS10040 (PFY12_10040)	-	2189736..2190503 (-)	768	WP_271147792.1	rhomboid family intramembrane serine protease	-
PFY12_RS10045 (PFY12_10045)	-	2190715..2191644 (+)	930	WP_271147793.1	DUF3078 domain-containing protein	-
PFY12_RS10050 (PFY12_10050)	-	2191713..2192357 (-)	645	WP_271147794.1	50S ribosomal protein L25/general stress protein Ctc	-
PFY12_RS10055 (PFY12_10055)	-	2192413..2193351 (-)	939	WP_271147795.1	ribose-phosphate pyrophosphokinase	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 41423.35 Da
• Isoelectric Point: 8.7459

>NTDB_id=774052 PFY12_RS10035 WP_271147791.1 2188589..2189698(-) (dprA) [Chryseobacterium camelliae strain VAN22-5A]
MYTEEHLFSIALRECSHIGDINFHKLIRAFGSAQNTWKTSSKELQKITGIGKKVISDIGNEKHLKFAEKEITFCQNNNIQ
INLRHLDQLPFLLKECEDAPAILYQKGKINTELHPLSIVGTRKITSYGKNFIETFFENTKKHKFISVSGLAAGTDKEVHT
ESIRQKIPTIAVLAHGFHTLYPSAHKTLSEKILSENGALFTEFNSSRKPDRENFIQRNRIIAGISSSTLVVETAFGGGSI
STATFANNYNRDVFALPGKITDKFSQGCNHLIFQNKAIAISTVKDLIDQIGFNSPKEKTEELFPHAEKSIQLSENQEPIY
NLITYHPQISLDDLAEKTAQPTHKILTIILELELLGKVKSLSGRQFVSI

Nucleotide

• Length: 1110 bp

>NTDB_id=774052 PFY12_RS10035 WP_271147791.1 2188589..2189698(-) (dprA) [Chryseobacterium camelliae strain VAN22-5A]
ATGTATACGGAAGAACATCTTTTTTCTATCGCTCTTAGGGAATGCTCTCATATAGGCGATATTAATTTCCACAAACTTAT
CCGGGCTTTTGGAAGCGCACAAAACACTTGGAAAACCTCCTCAAAAGAACTTCAAAAAATAACCGGAATCGGTAAAAAAG
TGATCTCTGACATTGGCAATGAAAAACATCTTAAATTTGCTGAAAAAGAAATTACTTTTTGTCAAAATAACAATATTCAA
ATCAACCTCCGCCATCTTGATCAGCTTCCTTTTTTATTAAAAGAATGTGAAGATGCTCCTGCCATACTCTATCAAAAAGG
AAAGATTAACACCGAATTACACCCTTTAAGTATCGTAGGAACCCGAAAAATCACTTCTTACGGCAAAAACTTTATCGAAA
CTTTTTTTGAAAACACTAAGAAGCACAAGTTTATATCCGTGAGCGGATTAGCAGCAGGTACAGATAAGGAAGTCCATACA
GAATCGATCAGACAAAAAATCCCAACCATCGCTGTTCTTGCACATGGCTTTCACACGTTATATCCTTCCGCTCATAAAAC
CCTGTCTGAAAAAATTTTATCGGAAAACGGAGCCCTTTTCACCGAATTCAATTCATCAAGAAAACCTGACAGAGAAAATT
TCATCCAACGGAACCGCATTATTGCAGGAATATCCTCTTCAACTCTCGTTGTAGAAACAGCTTTTGGAGGAGGATCGATC
AGTACGGCAACTTTCGCAAACAACTACAACAGGGATGTTTTTGCACTCCCCGGAAAAATTACGGATAAGTTCAGCCAAGG
GTGCAATCATCTTATTTTTCAGAACAAAGCCATTGCCATTTCAACCGTTAAAGACCTGATTGATCAAATAGGATTTAACA
GTCCTAAAGAAAAAACAGAAGAATTATTTCCCCACGCAGAAAAATCAATTCAACTATCTGAAAATCAAGAACCAATATAC
AATCTAATCACTTATCATCCACAAATTTCTTTAGATGATTTAGCAGAAAAAACAGCACAGCCAACCCATAAAATTTTGAC
TATAATCTTGGAATTAGAACTTTTGGGGAAGGTAAAATCACTTTCCGGGAGACAATTTGTATCTATTTAA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (306-363)

• DNA recombination-mediator protein A (DNA_processg_A) (74-278)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	53.846	98.645	0.531