Detailed information NTG0773867

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: QTN45_RS06930
• Genome accession: NZ_CP128500
• Coordinates: 1338168..1339436 (-)
• Length: 422 a.a.
• NCBI ID: WP_013353023.1
• Uniprot ID: A0A9P1NII9
• Organism: Bacillus amyloliquefaciens strain SRCM123364
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1333168..1344436

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QTN45_RS06905 (QTN45_06905)	-	1333342..1333512 (+)	171	WP_014470770.1	YrzK family protein	-
QTN45_RS06910 (QTN45_06910)	hisS	1333892..1335166 (+)	1275	WP_013353026.1	histidine--tRNA ligase	-
QTN45_RS06915 (QTN45_06915)	aspS	1335181..1336959 (+)	1779	WP_013353025.1	aspartate--tRNA ligase	-
QTN45_RS06925 (QTN45_06925)	-	1337286..1338050 (+)	765	WP_013353024.1	tRNA threonylcarbamoyladenosine dehydratase	-
QTN45_RS06930 (QTN45_06930)	rarA	1338168..1339436 (-)	1269	WP_013353023.1	replication-associated recombination protein A	Machinery gene
QTN45_RS06935 (QTN45_06935)	cymR	1339631..1340047 (+)	417	WP_013353022.1	cysteine metabolism transcriptional regulator CymR	-
QTN45_RS06940 (QTN45_06940)	-	1340066..1341205 (+)	1140	WP_013353021.1	cysteine desulfurase family protein	-
QTN45_RS06945 (QTN45_06945)	mnmA	1341242..1342357 (+)	1116	WP_013353020.1	tRNA 2-thiouridine(34) synthase MnmA	-
QTN45_RS06950 (QTN45_06950)	-	1342445..1343065 (+)	621	WP_088030693.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 422 a.a.
• Molecular weight: 46685.56 Da
• Isoelectric Point: 8.2451

>NTDB_id=773867 QTN45_RS06930 WP_013353023.1 1338168..1339436(-) (rarA) [Bacillus amyloliquefaciens strain SRCM123364]
MKPLAYRMRPANIEDIIGQEHLVKEDKIIGRMVRAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVIHNKKDME
IVVQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALRR
ALTDEHRGLGSYSVSVDDEAMDHFAQGCGGDVRSALNALELAVLSTKESSDGTIRITRETAEECLQKKSYTHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESISRRLLVIAYEDIGLASPQAGPRVLSAIQTAERIGFPEARIPLANAV
IELCLSPKSNSAISAVDEALKDIRSGKIGDVPKHLKDAHYKGAQELGRGIGYQYPHDFENGWVEQQYLPEPLKNKQYYKP
KQTGKFEAAIKQVYEKLLKQKK

Nucleotide

• Length: 1269 bp

>NTDB_id=773867 QTN45_RS06930 WP_013353023.1 1338168..1339436(-) (rarA) [Bacillus amyloliquefaciens strain SRCM123364]
ATGAAACCATTGGCGTATCGGATGCGGCCTGCCAATATCGAAGACATTATCGGCCAGGAACATTTGGTCAAAGAAGATAA
AATCATCGGCAGAATGGTGCGCGCAAAGCACCTATCATCCATGATCCTGTACGGACCGCCAGGCATCGGAAAAACGTCCA
TCGCCACAGCGATCGCAGGATCGACAAGCATCGCATTCAGAAAATTGAATGCCGTCATTCATAATAAAAAAGACATGGAA
ATTGTCGTACAGGAAGCGAAAATGTCAGGTCAGGTCATCTTAATACTTGATGAAGTGCACAGGCTTGATAAGGGGAAGCA
GGATTTTCTCCTGCCCTATTTAGAAAACGGCATGATTATTTTAATCGGCGCGACGACCGCCAATCCTTATCATGCCATTA
ACCCGGCCATCAGAAGCCGTACCCAGATATTCGAACTCGAACCGTTAACACCGGATCTGATCAAGCAGGCATTGAGAAGA
GCGCTCACAGATGAACACCGGGGACTCGGTTCCTACAGCGTTTCGGTGGACGACGAAGCGATGGATCATTTCGCGCAAGG
GTGTGGAGGAGACGTCCGTTCCGCTTTGAACGCACTGGAGCTTGCCGTGCTTTCCACAAAGGAATCAAGTGACGGCACGA
TCCGCATTACGCGGGAAACAGCGGAAGAATGTCTGCAGAAAAAAAGCTATACCCATGATAAAGACGGAGATGCGCATTAT
GACGTCTTATCCGCATTCCAAAAATCAATCCGCGGCTCAGACGCAAACGCCGCACTTCATTATTTAGCCCGACTGATCGA
AGCCGGCGATCTTGAAAGCATTTCAAGAAGACTTCTCGTAATCGCCTATGAAGATATCGGCCTTGCAAGCCCGCAGGCAG
GCCCCCGGGTGCTGAGCGCGATTCAGACCGCAGAGCGGATCGGCTTTCCCGAAGCGAGAATTCCGCTGGCGAATGCGGTA
ATCGAATTATGCCTTTCGCCAAAATCAAACTCCGCCATCTCAGCCGTTGATGAAGCGCTCAAAGATATCAGATCGGGTAA
AATCGGCGATGTGCCGAAACATTTAAAAGACGCCCACTATAAAGGAGCCCAAGAGCTCGGACGCGGAATCGGCTATCAAT
ATCCTCACGATTTCGAAAACGGATGGGTCGAACAGCAATATTTGCCTGAACCGTTAAAAAACAAACAATACTATAAACCG
AAACAAACGGGGAAATTTGAAGCCGCCATAAAGCAAGTGTATGAAAAACTGCTGAAACAGAAAAAATAA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• AAA C-terminal domain (AAA_assoc_2) (172-251)

3D structure

• AlphaFold DB: A0A9P1NII9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	90.736	99.763	0.905