Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   OSK17_RS06125 Genome accession   NZ_CP115738
Coordinates   1188166..1189317 (+) Length   383 a.a.
NCBI ID   WP_041850978.1    Uniprot ID   -
Organism   Bacillus subtilis strain W7     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1183166..1194317
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OSK17_RS06090 (OSK17_06090) yjbB 1183838..1185055 (+) 1218 WP_128472215.1 MFS transporter -
  OSK17_RS06095 (OSK17_06095) yjbC 1185220..1185798 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  OSK17_RS06100 (OSK17_06100) spx 1185979..1186374 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  OSK17_RS06105 (OSK17_06105) yjbE 1186417..1187073 (-) 657 WP_003232944.1 TerC family protein -
  OSK17_RS06110 (OSK17_06110) - 1187242..1187382 (+) 141 WP_119122854.1 hypothetical protein -
  OSK17_RS06115 (OSK17_06115) mecA 1187349..1188005 (+) 657 WP_003232942.1 adaptor protein MecA Regulator
  OSK17_RS06120 (OSK17_06120) - 1188000..1188122 (-) 123 WP_003245684.1 hypothetical protein -
  OSK17_RS06125 (OSK17_06125) coiA 1188166..1189317 (+) 1152 WP_041850978.1 competence protein CoiA Machinery gene
  OSK17_RS06130 (OSK17_06130) pepF 1189547..1191376 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  OSK17_RS06135 (OSK17_06135) - 1191414..1191581 (-) 168 WP_003244944.1 hypothetical protein -
  OSK17_RS06140 (OSK17_06140) spxH 1191896..1192795 (-) 900 WP_003245184.1 protease adaptor protein SpxH -
  OSK17_RS06145 (OSK17_06145) bhbI 1192792..1193190 (-) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  OSK17_RS06150 (OSK17_06150) cwlQ 1193445..1194179 (-) 735 WP_041850976.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44920.02 Da        Isoelectric Point: 9.9417

>NTDB_id=773642 OSK17_RS06125 WP_041850978.1 1188166..1189317(+) (coiA) [Bacillus subtilis strain W7]
MFSAVTEDGQMFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTESFKQEGIIPQWIMGYSRLKRTASSFYQLSTF
HWQFINASPYRELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSIQYSGWTKAIHRFRHKPH
RFNSKETNRLRLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGDKRAPIRFSAVLQQCKLHIHNK
NIALRFECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=773642 OSK17_RS06125 WP_041850978.1 1188166..1189317(+) (coiA) [Bacillus subtilis strain W7]
TTGTTTAGTGCTGTGACTGAAGACGGCCAAATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACG
GTTCTTCTGTCCGGTATGCGGAGGAGAGCTAGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCTCCATAGACATCGAACCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACACAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATCAAGGA
GCATATGCTTGCTGTTGAATATCAATGCGCCACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGAGCTTCAAACAAG
AAGGAATCATCCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAACTTTT
CATTGGCAGTTTATCAATGCAAGTCCATACAGAGAACTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAG
CCACATCATTCCATTCTACACAAACCATTCTTATTCCTCAGTCCAAACGATCCCTATTCATCGGGCAGGTGCAGGCGATC
TTTTTTTCACTGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAACTCAAAGGAAACAAATCGCCTTAGGCTGCTGTTTTATGAGAAACGGCAGACGCCTTTTTCTTTTCTGCCGAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAAGGATTTCTTTATTTGTTTA
TGACGGATCTTGGAGATAAACGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAG
AACATTGCACTCAGGTTCGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGGCGGCATACACTCCATGCAGGATCTCA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

98.928

97.389

0.963