Detailed information NTG0772935

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: PF547_RS10435
• Genome accession: NZ_CP115629
• Coordinates: 2170130..2170831 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain 2022CK-00337
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2165130..2175831

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PF547_RS10400 (PF547_10400)	kdsB	2165653..2166414 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
PF547_RS10405 (PF547_10405)	-	2166426..2167406 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
PF547_RS10410 (PF547_10410)	-	2167418..2167759 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
PF547_RS10415 (PF547_10415)	-	2167777..2168550 (+)	774	WP_000497298.1	TatD family hydrolase	-
PF547_RS10420 (PF547_10420)	-	2168588..2169196 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
PF547_RS10425 (PF547_10425)	-	2169206..2169760 (+)	555	WP_000841373.1	type II secretion system protein	-
PF547_RS10430 (PF547_10430)	xcpV	2169750..2170130 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
PF547_RS10435 (PF547_10435)	xcpW	2170130..2170831 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
PF547_RS10440 (PF547_10440)	gspK	2170831..2171790 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
PF547_RS10445 (PF547_10445)	-	2172021..2172617 (+)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
PF547_RS10450 (PF547_10450)	ung	2172668..2173381 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
PF547_RS10455 (PF547_10455)	-	2173378..2174502 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
PF547_RS10460 (PF547_10460)	tadA	2174509..2175012 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
PF547_RS10465 (PF547_10465)	-	2175082..2175525 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=772935 PF547_RS10435 WP_000594589.1 2170130..2170831(+) (xcpW) [Acinetobacter baumannii strain 2022CK-00337]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=772935 PF547_RS10435 WP_000594589.1 2170130..2170831(+) (xcpW) [Acinetobacter baumannii strain 2022CK-00337]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996