Detailed information NTG0077076

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: BSG8_RS04800
• Genome accession: NZ_AP025224
• Coordinates: 907377..908549 (+)
• Length: 390 a.a.
• NCBI ID: WP_014479273.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. natto strain G8
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 902377..913549

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSG8_RS04775 (BSG8_09280)	-	902845..904246 (+)	1402	Protein_921	hypothetical protein	-
BSG8_RS04780 (BSG8_09290)	-	904243..905232 (+)	990	WP_033881969.1	bifunctional lytic transglycosylase/C40 family peptidase	-
BSG8_RS04785 (BSG8_09300)	-	905247..905753 (+)	507	WP_031600318.1	hypothetical protein	-
BSG8_RS04790 (BSG8_09310)	-	905816..906199 (+)	384	WP_033881966.1	cystatin-like fold lipoprotein	-
BSG8_RS04795 (BSG8_09320)	-	906297..907085 (+)	789	WP_014479271.1	DUF4145 domain-containing protein	-
BSG8_RS04800 (BSG8_09330)	rapF	907377..908549 (+)	1173	WP_014479273.1	Rap family tetratricopeptide repeat protein	Regulator
BSG8_RS04805 (BSG8_09340)	-	908813..909259 (-)	447	WP_014479275.1	hypothetical protein	-
BSG8_RS04810 (BSG8_09350)	yhcN	909409..909984 (+)	576	WP_014479276.1	YhcN/YlaJ family sporulation lipoprotein	-
BSG8_RS04815	yhcQ	911005..911630 (-)	626	Protein_929	spore coat protein	-

Sequence

Protein

• Length: 390 a.a.
• Molecular weight: 46089.52 Da
• Isoelectric Point: 5.6997

>NTDB_id=77076 BSG8_RS04800 WP_014479273.1 907377..908549(+) (rapF) [Bacillus subtilis subsp. natto strain G8]
MRGVLDKDKIPYDVVTKKLNEWYTHIKNDALEKAKQIKKEVEEDLKKMEESKDALLYYQLLEFRHELLVNYMNSEKTEEL
KSSYLAMKKLEDQGNVTGMLEYYFHFFMGMYEFRRKKLTAAITSYRKAEAKLSEVDDEIEKAEFFFKVSYVYYYMKQTYF
SLNYAYRALEIYQRYDDYFIQRLRCQFVLGGNFIDSLEYEKALDTFMEALKIAEEIKIDYLIGMAHINIGICFDELKDYK
SASSHLKKALDLLEVSDHSFVAKTLFILTHVKIKQGDKESAGDYFQKGHEFVNKTNDAEYNAKFKILEGLYFSNGEYELI
SEAFAYFDSMKMYADLENYAVEVAQFFHRKQDFQRSSEYYMMSVEARNKIKKGEIINETQSGHIGSSGVN

Nucleotide

• Length: 1173 bp

>NTDB_id=77076 BSG8_RS04800 WP_014479273.1 907377..908549(+) (rapF) [Bacillus subtilis subsp. natto strain G8]
TTGCGAGGTGTTTTAGATAAAGATAAAATTCCATATGATGTAGTTACAAAAAAATTAAACGAATGGTACACCCATATAAA
AAATGATGCTCTTGAGAAAGCTAAACAAATAAAAAAAGAAGTTGAAGAAGATCTAAAAAAAATGGAAGAAAGTAAAGATG
CTTTACTATATTATCAATTACTTGAATTCCGCCACGAGTTATTGGTCAATTACATGAATTCAGAAAAGACAGAAGAATTG
AAAAGTTCATATCTGGCTATGAAAAAGTTGGAGGACCAGGGCAATGTTACTGGAATGTTGGAATATTATTTTCATTTCTT
TATGGGGATGTATGAATTCAGAAGAAAAAAACTAACTGCGGCAATAACTTCATATAGAAAAGCAGAAGCTAAATTAAGTG
AAGTAGATGATGAGATTGAAAAAGCAGAATTCTTTTTTAAAGTATCATATGTTTATTACTATATGAAGCAAACATACTTT
TCGCTTAACTATGCCTATAGAGCTCTTGAAATATATCAAAGGTATGATGATTACTTTATACAGAGATTAAGATGTCAATT
TGTATTAGGTGGAAACTTTATTGACTCCCTAGAATATGAAAAGGCATTGGATACATTTATGGAAGCGTTAAAAATAGCTG
AAGAAATTAAAATTGATTATTTAATTGGGATGGCACACATCAACATAGGTATTTGCTTTGATGAGTTAAAAGACTACAAA
AGTGCATCAAGTCATCTAAAAAAGGCGTTAGATTTGTTAGAGGTTAGCGATCACAGTTTTGTTGCGAAAACTCTTTTTAT
TTTAACACATGTAAAGATCAAGCAAGGTGACAAAGAATCAGCTGGTGACTATTTTCAAAAAGGACATGAGTTTGTAAATA
AAACAAATGATGCTGAATATAATGCTAAATTTAAAATATTAGAAGGACTTTATTTTTCAAATGGTGAATATGAATTGATT
AGTGAGGCTTTTGCATATTTTGATTCAATGAAAATGTATGCAGATTTAGAGAACTATGCTGTTGAAGTGGCCCAATTTTT
TCATCGGAAACAGGATTTTCAACGCTCAAGTGAATATTATATGATGAGTGTTGAAGCAAGAAACAAAATTAAAAAAGGAG
AGATTATTAATGAAACTCAGTCGGGTCATATTGGCAGTAGCGGTGTTAACTAG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (9-69)

• Tetratricopeptide repeat (TPR_12) (198-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	38.095	96.923	0.369