Detailed information NTG0770486

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: QQW97_RS14095
• Genome accession: NZ_CP127089
• Coordinates: 2609992..2611257 (+)
• Length: 421 a.a.
• NCBI ID: WP_004398500.1
• Uniprot ID: O34528
• Organism: Bacillus subtilis strain KK026
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2604992..2616257

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QQW97_RS14075 (QQW97_14070)	yrrB	2606363..2606983 (-)	621	WP_010886584.1	tetratricopeptide repeat protein	-
QQW97_RS14080 (QQW97_14075)	mnmA	2607069..2608184 (-)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
QQW97_RS14085 (QQW97_14080)	iscSA	2608215..2609354 (-)	1140	WP_003246057.1	cysteine desulfurase family protein	-
QQW97_RS14090 (QQW97_14085)	cymR	2609373..2609789 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
QQW97_RS14095 (QQW97_14090)	rarA	2609992..2611257 (+)	1266	WP_004398500.1	replication-associated recombination protein A	Machinery gene
QQW97_RS14100 (QQW97_14095)	tcdA	2611299..2612063 (-)	765	WP_009967893.1	ThiF family adenylyltransferase	-
QQW97_RS14110 (QQW97_14105)	aspS	2612399..2614177 (-)	1779	WP_003229758.1	aspartate--tRNA ligase	-
QQW97_RS14115 (QQW97_14110)	hisS	2614191..2615465 (-)	1275	WP_003229755.1	histidine--tRNA ligase	-
QQW97_RS14120 (QQW97_14115)	yrzK	2615847..2616017 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46514.38 Da
• Isoelectric Point: 7.2043

>NTDB_id=770486 QQW97_RS14095 WP_004398500.1 2609992..2611257(+) (rarA) [Bacillus subtilis strain KK026]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPELIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=770486 QQW97_RS14095 WP_004398500.1 2609992..2611257(+) (rarA) [Bacillus subtilis strain KK026]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGAATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGAACTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCAATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAGGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACTGGAAAGTTCGAATCTGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

3D structure

• AlphaFold DB: O34528

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	100	100	1