Detailed information NTG0770083

Bioinformatically predicted

Overview

• Name: codY
• Type: Regulator
• Locus tag: QQO10_RS06620
• Genome accession: NZ_CP127021
• Coordinates: 1333493..1334266 (+)
• Length: 257 a.a.
• NCBI ID: WP_000055337.1
• Uniprot ID: P63843
• Organism: Staphylococcus aureus strain CC239-MRSA-III(var.) isolate Trinidad&Tobago_2020-021_7037M
• Function: repression of comK (predicted from homology) Competence regulation

Genomic Context

Location: 1328493..1339266

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QQO10_RS06600 (QQO10_06600)	trmFO	1328837..1330144 (+)	1308	WP_000195254.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
QQO10_RS06605 (QQO10_06605)	xerC	1330561..1331457 (+)	897	WP_001015597.1	tyrosine recombinase XerC	-
QQO10_RS06610 (QQO10_06610)	hslV	1331454..1331999 (+)	546	WP_000072681.1	ATP-dependent protease subunit HslV	-
QQO10_RS06615 (QQO10_06615)	hslU	1332065..1333468 (+)	1404	WP_000379054.1	ATP-dependent protease ATPase subunit HslU	-
QQO10_RS06620 (QQO10_06620)	codY	1333493..1334266 (+)	774	WP_000055337.1	GTP-sensing pleiotropic transcriptional regulator CodY	Regulator
QQO10_RS06625 (QQO10_06625)	-	1334317..1334409 (+)	93	WP_001790530.1	hypothetical protein	-
QQO10_RS06630 (QQO10_06630)	rpsB	1334608..1335375 (+)	768	WP_285236857.1	30S ribosomal protein S2	-
QQO10_RS06635 (QQO10_06635)	-	1335409..1335522 (+)	114	WP_001789890.1	hypothetical protein	-
QQO10_RS06640 (QQO10_06640)	tsf	1335557..1336438 (+)	882	WP_000201387.1	translation elongation factor Ts	-
QQO10_RS06645 (QQO10_06645)	pyrH	1336575..1337297 (+)	723	WP_000057330.1	UMP kinase	-
QQO10_RS06650 (QQO10_06650)	frr	1337316..1337870 (+)	555	WP_044116402.1	ribosome recycling factor	-
QQO10_RS06655 (QQO10_06655)	-	1338243..1339013 (+)	771	WP_000473701.1	isoprenyl transferase	-

Sequence

Protein

• Length: 257 a.a.
• Molecular weight: 28755.13 Da
• Isoelectric Point: 6.0680

>NTDB_id=770083 QQO10_RS06620 WP_000055337.1 1333493..1334266(+) (codY) [Staphylococcus aureus strain CC239-MRSA-III(var.) isolate Trinidad&Tobago_2020-021_7037M]
MSLLSKTRELNTLLQKHKGIAVDFKDVAQTISSVTVTNVFIVSRRGKILGSSLNELLKSQRIIQMLEERHIPSEYTERLM
EVKQTESNIDIDNVLTVFPPENRELFIDSRTTIFPILGGGERLGTLVLGRVHDDFNENDLVLGEYAATVIGMEILREKHS
EVEKEARDKAAITMAINSLSYSEKEAIEHIFEELGGTEGLLIASKVADRVGITRSVIVNALRKLESAGVIESRSLGMKGT
FIKVKKEKFLDELEKSK

Nucleotide

• Length: 774 bp

>NTDB_id=770083 QQO10_RS06620 WP_000055337.1 1333493..1334266(+) (codY) [Staphylococcus aureus strain CC239-MRSA-III(var.) isolate Trinidad&Tobago_2020-021_7037M]
ATGAGCTTATTATCTAAAACGAGAGAGTTAAACACGTTACTTCAAAAACACAAAGGTATTGCGGTTGATTTTAAAGATGT
AGCACAAACGATTAGTAGCGTAACTGTAACAAATGTATTTATTGTATCGCGTCGAGGTAAAATTTTAGGATCGAGTCTAA
ATGAATTATTAAAAAGTCAAAGAATTATTCAAATGTTGGAAGAAAGACATATTCCAAGTGAATATACAGAACGATTAATG
GAAGTTAAACAAACAGAATCAAATATTGATATCGACAATGTATTAACAGTATTCCCACCTGAAAACAGAGAATTATTCAT
AGATAGTCGTACAACTATCTTCCCAATTTTAGGTGGAGGGGAAAGATTAGGTACATTAGTACTTGGTCGAGTACATGATG
ATTTTAATGAAAATGATTTGGTACTAGGTGAATATGCTGCTACAGTTATTGGTATGGAAATCTTACGTGAGAAGCATAGT
GAAGTAGAAAAAGAAGCGCGCGATAAAGCTGCTATTACAATGGCAATTAATTCATTATCTTATTCTGAAAAAGAAGCGAT
TGAACATATCTTTGAAGAACTTGGCGGTACGGAAGGCCTATTAATCGCATCAAAAGTTGCAGATAGAGTTGGTATTACTA
GATCTGTAATTGTAAATGCACTACGTAAATTAGAAAGTGCTGGTGTAATTGAATCACGTTCTTTAGGAATGAAAGGTACT
TTCATTAAAGTTAAAAAAGAAAAATTCTTAGATGAATTAGAAAAAAGTAAATAA

Domains

Predicted by InterProScan.

• CodY GAF-like domain (CodY) (2-178)

• CodY helix-turn-helix domain (HTH_CodY) (198-255)

3D structure

• AlphaFold DB: P63843

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
codY	Bacillus subtilis subsp. subtilis str. 168	64.202	100	0.642
codY	Lactococcus lactis subsp. lactis strain DGCC12653	42.802	100	0.428