Detailed information
Bioinformatically predicted
Overview
| Name | comQ | Type | Machinery gene |
| Locus tag | QP018_RS12495 | Genome accession | NZ_CP126975 |
| Coordinates | 2636229..2636516 (+) | Length | 95 a.a. |
| NCBI ID | WP_246874632.1 | Uniprot ID | A0AAX3XF01 |
| Organism | Gallibacterium anatis strain BJF12 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2631229..2641516
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QP018_RS12465 (QP018_12465) | - | 2631992..2632963 (+) | 972 | WP_196247769.1 | sigma 54-interacting transcriptional regulator | - |
| QP018_RS12470 (QP018_12470) | sspA | 2633104..2633742 (+) | 639 | WP_013745826.1 | stringent starvation protein SspA | - |
| QP018_RS12475 (QP018_12475) | - | 2633752..2634213 (+) | 462 | WP_039085375.1 | ClpXP protease specificity-enhancing factor | - |
| QP018_RS12480 (QP018_12480) | - | 2634357..2634890 (+) | 534 | WP_039149627.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| QP018_RS12485 (QP018_12485) | - | 2634880..2635602 (+) | 723 | WP_210640477.1 | Type II secretory pathway, component PulJ | - |
| QP018_RS12490 (QP018_12490) | - | 2635586..2636239 (+) | 654 | WP_210640424.1 | DUF2572 family protein | - |
| QP018_RS12495 (QP018_12495) | comQ | 2636229..2636516 (+) | 288 | WP_246874632.1 | DUF5374 domain-containing protein | Machinery gene |
| QP018_RS12500 (QP018_12500) | glpE | 2636576..2636902 (+) | 327 | WP_021461111.1 | thiosulfate sulfurtransferase GlpE | - |
| QP018_RS12505 (QP018_12505) | - | 2636905..2637837 (-) | 933 | WP_285090892.1 | LysR substrate-binding domain-containing protein | - |
| QP018_RS12510 (QP018_12510) | - | 2637981..2638661 (+) | 681 | WP_285090893.1 | hydrolase | - |
| QP018_RS12515 (QP018_12515) | - | 2638740..2639261 (+) | 522 | WP_094871990.1 | NAD(P)H-dependent oxidoreductase | - |
| QP018_RS12520 (QP018_12520) | - | 2639258..2640163 (+) | 906 | WP_039094670.1 | pirin family protein | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 10866.71 Da Isoelectric Point: 9.3579
>NTDB_id=769647 QP018_RS12495 WP_246874632.1 2636229..2636516(+) (comQ) [Gallibacterium anatis strain BJF12]
MQRNLQGSAIINVLVTLMFLSLLLLSTQHWIKRQQQQTVILWQATQALQIAENQWNLRVIGENCEKNVQQNGIVFNIQCS
GNQVVVHYPLGKIVL
MQRNLQGSAIINVLVTLMFLSLLLLSTQHWIKRQQQQTVILWQATQALQIAENQWNLRVIGENCEKNVQQNGIVFNIQCS
GNQVVVHYPLGKIVL
Nucleotide
Download Length: 288 bp
>NTDB_id=769647 QP018_RS12495 WP_246874632.1 2636229..2636516(+) (comQ) [Gallibacterium anatis strain BJF12]
ATGCAACGTAATCTGCAAGGCAGTGCGATTATCAATGTCTTGGTGACGCTGATGTTTTTGTCACTGTTATTACTGTCGAC
ACAGCATTGGATTAAGCGGCAACAGCAGCAAACAGTAATTTTGTGGCAGGCGACACAAGCTTTGCAAATTGCTGAAAATC
AATGGAATTTAAGAGTCATCGGTGAAAATTGTGAAAAAAACGTACAACAAAACGGCATTGTTTTTAATATTCAATGTAGC
GGCAATCAGGTAGTGGTGCATTATCCGCTGGGAAAAATTGTGTTGTAA
ATGCAACGTAATCTGCAAGGCAGTGCGATTATCAATGTCTTGGTGACGCTGATGTTTTTGTCACTGTTATTACTGTCGAC
ACAGCATTGGATTAAGCGGCAACAGCAGCAAACAGTAATTTTGTGGCAGGCGACACAAGCTTTGCAAATTGCTGAAAATC
AATGGAATTTAAGAGTCATCGGTGAAAATTGTGAAAAAAACGTACAACAAAACGGCATTGTTTTTAATATTCAATGTAGC
GGCAATCAGGTAGTGGTGCATTATCCGCTGGGAAAAATTGTGTTGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comQ | Haemophilus influenzae Rd KW20 |
37.895 |
100 |
0.379 |