Detailed information NTG0766309

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: QIH95_RS20475
• Genome accession: NZ_CP126013
• Coordinates: 4446981..4448033 (+)
• Length: 350 a.a.
• NCBI ID: WP_038958762.1
• Uniprot ID: A0ABV2RXF0
• Organism: Bradyrhizobium japonicum strain S11L-Bj
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 4441981..4453033

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QIH95_RS20455 (QIH95_20440)	-	4442620..4444209 (+)	1590	WP_038958766.1	ABC transporter substrate-binding protein	-
QIH95_RS20460 (QIH95_20445)	-	4444270..4445193 (+)	924	WP_038936567.1	ABC transporter permease	-
QIH95_RS20465 (QIH95_20450)	-	4445190..4446011 (+)	822	WP_038958765.1	ABC transporter permease	-
QIH95_RS20470 (QIH95_20455)	-	4446008..4446988 (+)	981	WP_135216794.1	ABC transporter ATP-binding protein	-
QIH95_RS20475 (QIH95_20460)	amiE	4446981..4448033 (+)	1053	WP_038958762.1	ABC transporter ATP-binding protein	Regulator
QIH95_RS20480 (QIH95_20465)	-	4448241..4448459 (+)	219	WP_038958760.1	hypothetical protein	-
QIH95_RS20485 (QIH95_20470)	-	4449426..4449608 (-)	183	Protein_4079	isoprenylcysteine carboxylmethyltransferase family protein	-
QIH95_RS20490 (QIH95_20475)	-	4449848..4451590 (-)	1743	WP_028170234.1	adenylate/guanylate cyclase domain-containing protein	-
QIH95_RS20495 (QIH95_20480)	-	4451966..4452712 (+)	747	WP_028170235.1	C13 family peptidase	-

Sequence

Protein

• Length: 350 a.a.
• Molecular weight: 38523.99 Da
• Isoelectric Point: 7.1212

>NTDB_id=766309 QIH95_RS20475 WP_038958762.1 4446981..4448033(+) (amiE) [Bradyrhizobium japonicum strain S11L-Bj]
MHEPQAMQGEARPDDDLILSVEDLAVHFPMGGGWLGRSRRVLRAVDGVDLRLRRGECLGLVGESGSGKSTVALSILGLLT
PTRGRIVLDGQVVTNRQSGDRKSLARTVQIVFQDPYASLNPRQTVRRTLEDPLRVHGVTAKSEVEDRVATMLRHVGLRPE
QADRYPHEFSGGQRQRIGIARALILNPRIVICDEPVSALDVSIRAQIINLLLELKDTLGLSYIMISHDLGVVEHMSDRVA
VMYLGRIVENGHWREIFERPAHPYTQALIAAIPDPLRHAPLATTGGDLPNPLNPPNGCAFSPRCRYAEAVCRHEPGPVLE
TRADGHEVRCWRADEIAGQTQLASTEGGHP

Nucleotide

• Length: 1053 bp

>NTDB_id=766309 QIH95_RS20475 WP_038958762.1 4446981..4448033(+) (amiE) [Bradyrhizobium japonicum strain S11L-Bj]
ATGCATGAGCCGCAAGCCATGCAGGGGGAGGCGAGGCCGGACGACGACCTCATTCTCAGCGTCGAGGATCTCGCGGTTCA
TTTTCCGATGGGGGGCGGCTGGCTCGGCCGCAGCCGGCGGGTGCTCCGTGCCGTCGACGGTGTCGATCTCAGGCTGAGAC
GAGGCGAATGCCTCGGCCTCGTCGGCGAGTCCGGCTCGGGCAAGTCGACCGTCGCATTGTCGATCCTGGGGCTCCTGACG
CCGACGCGCGGCCGCATCGTGCTGGACGGGCAGGTGGTGACGAACAGGCAATCCGGCGACCGAAAGTCGCTGGCCCGCAC
CGTGCAGATCGTCTTTCAGGATCCCTACGCCTCGCTCAACCCACGCCAGACCGTCCGCCGCACGCTGGAAGATCCCCTGC
GTGTGCATGGCGTGACCGCGAAAAGCGAGGTCGAGGACCGTGTTGCGACGATGCTGCGGCATGTCGGCCTGCGGCCGGAA
CAGGCCGACCGCTATCCGCACGAATTCTCCGGCGGCCAGCGCCAGCGCATCGGGATTGCGCGCGCCCTGATCCTCAATCC
CAGGATCGTCATCTGCGACGAGCCGGTATCGGCGCTCGACGTCTCGATCCGCGCCCAGATCATCAATTTGCTGCTGGAAT
TGAAGGACACGCTCGGTCTCTCCTACATCATGATCAGCCACGACCTCGGCGTCGTCGAGCACATGAGCGACCGCGTCGCC
GTCATGTATCTCGGCCGCATCGTCGAGAACGGCCACTGGCGCGAAATCTTCGAACGGCCGGCGCACCCCTATACGCAAGC
CCTGATCGCGGCCATCCCCGATCCGCTGCGTCATGCGCCGTTGGCGACGACAGGCGGCGACCTTCCCAACCCGCTCAATC
CGCCGAACGGATGCGCCTTCAGCCCGCGTTGCCGGTACGCGGAGGCCGTGTGTCGTCACGAGCCCGGTCCGGTGCTGGAA
ACGCGCGCCGATGGACATGAGGTGAGGTGCTGGCGGGCGGACGAGATTGCGGGGCAGACGCAATTGGCTTCGACTGAGGG
CGGGCATCCCTAG

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (248-311)

• ABC transporter (ABC_tran) (46-196)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus thermophilus LMG 18311	39.329	93.714	0.369
amiE	Streptococcus thermophilus LMD-9	39.329	93.714	0.369
amiE	Streptococcus salivarius strain HSISS4	37.685	96.286	0.363