Detailed information NTG0766236

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: QIH85_RS21105
• Genome accession: NZ_CP126010
• Coordinates: 4404700..4405752 (+)
• Length: 350 a.a.
• NCBI ID: WP_014494880.1
• Uniprot ID: -
• Organism: Bradyrhizobium japonicum strain N03G-Bj
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 4399700..4410752

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QIH85_RS21085 (QIH85_21085)	-	4400339..4401928 (+)	1590	WP_028170233.1	ABC transporter substrate-binding protein	-
QIH85_RS21090 (QIH85_21090)	-	4401989..4402912 (+)	924	WP_014494877.1	ABC transporter permease	-
QIH85_RS21095 (QIH85_21095)	-	4402909..4403730 (+)	822	WP_038936568.1	ABC transporter permease	-
QIH85_RS21100 (QIH85_21100)	-	4403727..4404707 (+)	981	WP_039147918.1	ABC transporter ATP-binding protein	-
QIH85_RS21105 (QIH85_21105)	amiE	4404700..4405752 (+)	1053	WP_014494880.1	ABC transporter ATP-binding protein	Regulator
QIH85_RS21110 (QIH85_21110)	-	4405960..4406178 (+)	219	WP_038958760.1	hypothetical protein	-
QIH85_RS21115 (QIH85_21115)	-	4407083..4407301 (-)	219	WP_051664569.1	isoprenylcysteine carboxylmethyltransferase family protein	-
QIH85_RS21120 (QIH85_21120)	-	4407568..4409310 (-)	1743	WP_039147927.1	adenylate/guanylate cyclase domain-containing protein	-
QIH85_RS21125 (QIH85_21125)	-	4409686..4410432 (+)	747	WP_028170235.1	C13 family peptidase	-

Sequence

Protein

• Length: 350 a.a.
• Molecular weight: 38471.91 Da
• Isoelectric Point: 6.9600

>NTDB_id=766236 QIH85_RS21105 WP_014494880.1 4404700..4405752(+) (amiE) [Bradyrhizobium japonicum strain N03G-Bj]
MHEPQDMRGEARSDDDLILSIEDLAVHFPMGGGLLGRSRRVLRAVDGVDLSLRRGECLGLVGESGSGKSTVALSILGLLT
PTRGRIVLDGQVVTNRQSGDRKSLARTVQIVFQDPYASLNPRQTVRRTLEDPLRVHGVTAKSEIEDRVATMLRHVGLRPE
QADRYPHEFSGGQRQRIGIARALILNPRIVICDEPVSALDVSIRAQIINLLLELKDTLGLSYIMISHDLGVVEHMSDRVA
VMYLGRIVENGHWREIFERPAHPYTQALIAAIPDPLRHAPLATTGGDLPNPLNPPNGCAFSPRCRYAEAVCRHEPGPVLE
TRADGHEVRCWRADEIAGQTQLASTEGGHP

Nucleotide

• Length: 1053 bp

>NTDB_id=766236 QIH85_RS21105 WP_014494880.1 4404700..4405752(+) (amiE) [Bradyrhizobium japonicum strain N03G-Bj]
ATGCATGAGCCGCAAGACATGCGGGGTGAAGCGAGGTCGGACGACGATCTCATTCTCAGCATCGAGGATCTCGCGGTTCA
TTTTCCGATGGGGGGCGGCCTGCTGGGCCGCAGCCGGCGGGTGCTCCGTGCCGTCGACGGTGTCGATCTCAGCCTGAGAC
GGGGCGAATGCCTCGGCCTCGTCGGCGAGTCCGGCTCGGGCAAGTCGACCGTCGCATTGTCGATCCTGGGGCTCCTGACG
CCGACGCGCGGCCGTATCGTGCTGGACGGGCAGGTGGTGACGAACAGGCAGTCCGGCGACCGAAAGTCGCTGGCCCGCAC
CGTGCAGATCGTCTTTCAGGATCCCTACGCCTCGCTCAACCCACGCCAGACCGTCCGCCGCACGCTGGAAGATCCCCTGC
GTGTGCATGGCGTGACCGCGAAAAGCGAGATCGAGGACCGTGTTGCGACGATGCTGCGGCATGTCGGCCTGCGGCCGGAA
CAGGCCGACCGCTATCCGCACGAATTCTCCGGTGGCCAGCGCCAGCGCATCGGGATTGCGCGCGCCCTGATCCTCAATCC
CAGGATCGTCATCTGCGACGAGCCGGTATCGGCGCTCGACGTCTCGATCCGCGCCCAGATCATCAATTTGCTGCTGGAAT
TGAAGGACACGCTCGGTCTCTCCTACATCATGATCAGCCACGACCTCGGCGTCGTCGAGCACATGAGCGACCGCGTCGCC
GTCATGTATCTCGGCCGCATCGTCGAGAACGGCCACTGGCGCGAAATTTTTGAGCGCCCGGCGCACCCCTATACGCAAGC
CCTGATCGCGGCCATCCCCGATCCGCTGCGTCATGCGCCGTTGGCGACGACAGGCGGCGACCTTCCCAACCCGCTCAATC
CGCCGAACGGATGCGCCTTCAGCCCGCGTTGCCGGTACGCGGAGGCCGTGTGTCGTCACGAGCCCGGTCCGGTGCTGGAA
ACGCGCGCCGATGGACATGAGGTGAGGTGCTGGCGGGCGGACGAGATTGCGGGGCAGACGCAATTGGCTTCGACCGAGGG
CGGGCATCCCTAG

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (248-311)

• ABC transporter (ABC_tran) (46-196)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus thermophilus LMG 18311	39.329	93.714	0.369
amiE	Streptococcus thermophilus LMD-9	39.329	93.714	0.369
amiE	Streptococcus salivarius strain HSISS4	37.685	96.286	0.363