Detailed information NTG0766022

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: QNK08_RS13780
• Genome accession: NZ_CP125983
• Coordinates: 2553839..2555104 (+)
• Length: 421 a.a.
• NCBI ID: WP_014480427.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain ZKY04
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2548839..2560104

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QNK08_RS13760 (QNK08_13785)	yrrB	2550210..2550830 (-)	621	WP_206697897.1	tetratricopeptide repeat protein	-
QNK08_RS13765 (QNK08_13790)	mnmA	2550916..2552031 (-)	1116	WP_014480424.1	tRNA 2-thiouridine(34) synthase MnmA	-
QNK08_RS13770 (QNK08_13795)	iscSA	2552062..2553201 (-)	1140	WP_014480425.1	cysteine desulfurase family protein	-
QNK08_RS13775 (QNK08_13800)	cymR	2553220..2553636 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
QNK08_RS13780 (QNK08_13805)	rarA	2553839..2555104 (+)	1266	WP_014480427.1	replication-associated recombination protein A	Machinery gene
QNK08_RS13785 (QNK08_13810)	tcdA	2555144..2555908 (-)	765	WP_046160684.1	ThiF family adenylyltransferase	-
QNK08_RS13795 (QNK08_13820)	aspS	2556243..2558021 (-)	1779	WP_015714438.1	aspartate--tRNA ligase	-
QNK08_RS13800 (QNK08_13825)	hisS	2558035..2559306 (-)	1272	WP_264379327.1	histidine--tRNA ligase	-
QNK08_RS13805 (QNK08_13830)	yrzK	2559688..2559858 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46463.29 Da
• Isoelectric Point: 7.2043

>NTDB_id=766022 QNK08_RS13780 WP_014480427.1 2553839..2555104(+) (rarA) [Bacillus subtilis strain ZKY04]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDSGWVEQQYLPDSLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=766022 QNK08_RS13780 WP_014480427.1 2553839..2555104(+) (rarA) [Bacillus subtilis strain ZKY04]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGGATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGC
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGTGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAGCGGTTGGGTCGAACAACAATACCTCCCTGATTCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTATGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.287	100	0.993