Detailed information NTG0765574

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: QM970_RS13800
• Genome accession: NZ_CP125980
• Coordinates: 2555217..2556482 (+)
• Length: 421 a.a.
• NCBI ID: WP_014480427.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain ZKY03
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2550217..2561482

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QM970_RS13780 (QM970_13790)	yrrB	2551588..2552208 (-)	621	WP_206697897.1	tetratricopeptide repeat protein	-
QM970_RS13785 (QM970_13795)	mnmA	2552294..2553409 (-)	1116	WP_014480424.1	tRNA 2-thiouridine(34) synthase MnmA	-
QM970_RS13790 (QM970_13800)	iscSA	2553440..2554579 (-)	1140	WP_014480425.1	cysteine desulfurase family protein	-
QM970_RS13795 (QM970_13805)	cymR	2554598..2555014 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
QM970_RS13800 (QM970_13810)	rarA	2555217..2556482 (+)	1266	WP_014480427.1	replication-associated recombination protein A	Machinery gene
QM970_RS13805 (QM970_13815)	tcdA	2556522..2557286 (-)	765	WP_046160684.1	ThiF family adenylyltransferase	-
QM970_RS13815 (QM970_13825)	aspS	2557621..2559399 (-)	1779	WP_015714438.1	aspartate--tRNA ligase	-
QM970_RS13820 (QM970_13830)	hisS	2559413..2560684 (-)	1272	WP_264379327.1	histidine--tRNA ligase	-
QM970_RS13825 (QM970_13835)	yrzK	2561066..2561236 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46463.29 Da
• Isoelectric Point: 7.2043

>NTDB_id=765574 QM970_RS13800 WP_014480427.1 2555217..2556482(+) (rarA) [Bacillus subtilis strain ZKY03]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDSGWVEQQYLPDSLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=765574 QM970_RS13800 WP_014480427.1 2555217..2556482(+) (rarA) [Bacillus subtilis strain ZKY03]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGGATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGC
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGTGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAGCGGTTGGGTCGAACAACAATACCTCCCTGATTCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTATGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.287	100	0.993