Detailed information NTG0764720

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: O0R49_RS13070
• Genome accession: NZ_CP114177
• Coordinates: 2506934..2509318 (-)
• Length: 794 a.a.
• NCBI ID: WP_269195404.1
• Uniprot ID: -
• Organism: Bacillus safensis strain PLA 1006
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2501934..2514318

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
O0R49_RS13035 (O0R49_13035)	-	2502919..2503647 (+)	729	WP_048238982.1	amino acid ABC transporter ATP-binding protein	-
O0R49_RS13040 (O0R49_13040)	-	2503661..2504470 (+)	810	WP_269195402.1	transporter substrate-binding domain-containing protein	-
O0R49_RS13045 (O0R49_13045)	-	2504548..2505201 (+)	654	WP_268427890.1	amino acid ABC transporter permease	-
O0R49_RS13050 (O0R49_13050)	-	2505217..2505867 (+)	651	WP_024427867.1	amino acid ABC transporter permease	-
O0R49_RS13055 (O0R49_13055)	-	2505947..2506078 (-)	132	WP_003216198.1	YrzQ family protein	-
O0R49_RS13060 (O0R49_13060)	-	2506099..2506290 (-)	192	WP_003216308.1	hypothetical protein	-
O0R49_RS13065 (O0R49_13065)	-	2506304..2506822 (-)	519	WP_269195403.1	PRC-barrel domain-containing protein	-
O0R49_RS13070 (O0R49_13070)	recD2	2506934..2509318 (-)	2385	WP_269195404.1	ATP-dependent RecD-like DNA helicase	Machinery gene
O0R49_RS13075 (O0R49_13075)	-	2509338..2509991 (-)	654	WP_048238986.1	tetratricopeptide repeat protein	-
O0R49_RS13080 (O0R49_13080)	mnmA	2510052..2511170 (-)	1119	WP_024423123.1	tRNA 2-thiouridine(34) synthase MnmA	-
O0R49_RS13085 (O0R49_13085)	-	2511265..2512407 (-)	1143	WP_269195405.1	cysteine desulfurase family protein	-
O0R49_RS13090 (O0R49_13090)	cymR	2512426..2512845 (-)	420	WP_024423125.1	cysteine metabolism transcriptional regulator CymR	-

Sequence

Protein

• Length: 794 a.a.
• Molecular weight: 89100.62 Da
• Isoelectric Point: 5.2628

>NTDB_id=764720 O0R49_RS13070 WP_269195404.1 2506934..2509318(-) (recD2) [Bacillus safensis strain PLA 1006]
MQEHPDQMKLEDEPFLKGTIQAVIFHNESNLYSVLKVKVIETSENLEEKTASVTGYFPALHEDETYTFYGKVTSHPRFGE
QFQATHFQKEVPTTKQGIIHYLSSDLFEGIGKKTAEEIVGQLGNQTLHKIMRDPAVLYDVPRLSKKKADKLAAALQEHQG
LEQIMISLNQYGFGPQLSMKIYQVYESETLQKIEENPYQLVKDVEGIGFIKADELGARTGISGNDPERIRAALLYTVETA
SLQDGHTYIQTKDLIVETRKLLNQTGNDYKVTEMDVANQIIALGEGKEMIIEDERCYHPSLFYAEQSVAKRIQKIVSQTE
YANQFPESEFLLALGELEERLGVQYAPTQKEAIQKALMSPMLLLTGGPGTGKTTVIKGIVELYSDLHGVSLDPSDYKKDE
SFPFVLAAPTGRAAKRMTESTGLPAVTIHRLLGWNGSEGFSHDEEQPIEGKLVIIDESSMLDIWLANHLFKAIPDHIQVI
MVGDEHQLPSVGPGQVLRDLLASKAVPAVTLTDIYRQADGSTIVELAHDMKNGVLPKDITARSKDRSFIQCSADQMKEVI
EKVVSNAAQKGFSAKDIQVLAPMYKGKAGINELNKMLQHILNPKKPKGREIPFGDVVYRTGDKVLQLVNQPENNIFNGDI
GEIVSIFYAKENTEKEDMAVISFDGNEITFTKKDFHQFTHAYCCSIHKSQGSEFPIVVLPVVRSYYRMLRRNLLYTAITR
SKKFLILCGEESALEWGVKNNEDSLRQTSLTMRLVQTEQIMDAELEALQKELPFSVHDANIGMEGITPFDFMHE

Nucleotide

• Length: 2385 bp

>NTDB_id=764720 O0R49_RS13070 WP_269195404.1 2506934..2509318(-) (recD2) [Bacillus safensis strain PLA 1006]
GTGCAGGAACATCCAGATCAAATGAAGCTTGAGGACGAACCGTTTTTAAAGGGGACCATTCAAGCCGTTATTTTCCATAA
TGAAAGTAATTTATACTCGGTGTTAAAGGTGAAAGTCATTGAAACATCGGAAAACTTAGAGGAAAAAACAGCATCTGTCA
CAGGCTACTTCCCAGCACTTCATGAGGACGAAACCTACACCTTCTATGGCAAAGTCACAAGCCATCCGAGATTTGGTGAA
CAGTTTCAGGCCACTCATTTTCAAAAGGAAGTGCCAACAACGAAGCAAGGAATCATTCATTATCTCTCAAGTGATTTATT
TGAGGGGATAGGGAAAAAGACCGCTGAAGAAATCGTGGGGCAGCTTGGCAATCAGACGCTTCATAAAATTATGCGTGACC
CAGCTGTTTTGTACGATGTTCCGCGCTTATCAAAAAAGAAGGCGGATAAGCTGGCCGCAGCGCTTCAGGAGCATCAAGGG
CTGGAACAAATCATGATCAGCTTGAATCAATATGGCTTTGGTCCACAGCTCAGCATGAAGATTTACCAAGTGTACGAAAG
TGAAACGCTGCAGAAAATCGAGGAAAATCCCTATCAGCTTGTTAAGGATGTCGAGGGAATCGGATTTATTAAGGCGGATG
AGCTTGGCGCTAGAACAGGCATCTCAGGAAATGACCCAGAGCGGATTCGTGCCGCCTTGCTATATACAGTGGAGACAGCT
AGTCTTCAGGACGGTCATACGTACATACAAACAAAAGATTTGATCGTCGAAACCCGCAAGCTGCTCAACCAAACAGGCAA
TGATTACAAAGTGACTGAAATGGATGTTGCCAATCAGATCATTGCACTTGGTGAAGGAAAAGAAATGATCATTGAAGATG
AGCGCTGCTATCATCCATCCTTATTTTATGCGGAGCAAAGTGTCGCCAAACGCATTCAAAAAATCGTCTCCCAAACGGAA
TATGCAAATCAATTTCCTGAATCAGAATTTCTGCTTGCACTTGGGGAGCTGGAGGAGCGGTTAGGCGTTCAGTATGCACC
GACACAAAAGGAAGCGATTCAAAAGGCACTCATGTCCCCGATGCTGCTTTTAACAGGCGGCCCTGGAACAGGGAAGACAA
CAGTCATTAAAGGGATTGTCGAGCTTTACAGTGATCTTCACGGTGTATCTCTTGATCCGAGTGATTATAAAAAAGATGAA
TCCTTCCCATTTGTACTTGCGGCACCAACTGGACGGGCGGCTAAACGGATGACAGAATCAACAGGACTTCCGGCTGTGAC
CATTCACCGGCTGCTAGGCTGGAATGGTTCGGAGGGCTTCTCGCATGATGAGGAACAGCCAATTGAAGGAAAGCTTGTCA
TCATTGATGAATCAAGTATGCTGGATATTTGGCTGGCGAATCATTTGTTTAAAGCGATTCCTGATCATATTCAAGTGATT
ATGGTAGGGGATGAACATCAGCTGCCATCTGTCGGACCAGGCCAAGTTTTACGGGATTTGCTTGCCTCAAAAGCTGTGCC
GGCTGTTACCTTGACAGATATTTACCGGCAGGCAGACGGCTCAACTATTGTTGAACTTGCCCATGATATGAAAAATGGTG
TGCTGCCAAAGGATATTACTGCACGCTCAAAGGATCGGTCCTTTATTCAATGTTCAGCTGATCAAATGAAAGAAGTCATT
GAGAAAGTCGTCAGCAATGCTGCTCAAAAAGGGTTTTCGGCAAAGGACATTCAAGTGCTGGCACCGATGTATAAAGGAAA
AGCAGGCATCAATGAGCTCAACAAAATGCTGCAGCACATTTTGAATCCTAAAAAACCAAAAGGCAGAGAAATCCCGTTTG
GTGATGTGGTGTACCGGACAGGTGATAAAGTGCTTCAGCTTGTGAATCAGCCGGAGAATAACATTTTTAACGGCGATATC
GGTGAAATTGTCTCGATTTTTTATGCAAAAGAAAATACAGAAAAAGAAGACATGGCCGTCATCTCCTTTGATGGAAATGA
AATCACCTTTACAAAAAAGGATTTTCATCAATTTACACATGCGTATTGCTGTTCTATTCACAAATCACAAGGTAGTGAAT
TTCCAATTGTTGTGCTGCCAGTCGTGAGAAGCTATTACCGAATGCTTCGGCGGAATCTGCTGTACACAGCCATTACACGA
AGTAAAAAGTTTTTAATTTTGTGCGGCGAGGAATCAGCGCTGGAGTGGGGCGTGAAAAACAATGAGGATTCCCTCAGACA
AACGTCCCTAACGATGCGGCTCGTGCAAACCGAACAAATCATGGATGCTGAGCTTGAAGCGCTCCAAAAAGAGCTTCCGT
TTAGCGTGCATGACGCAAATATTGGCATGGAGGGAATCACTCCGTTTGATTTTATGCATGAGTAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-248)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-659)

• AAA domain (AAA_30) (345-553)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	79.523	100	0.797