Detailed information NTG0763403

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: QLH41_RS14935
• Genome accession: NZ_CP125660
• Coordinates: 2811942..2813207 (+)
• Length: 421 a.a.
• NCBI ID: WP_004398500.1
• Uniprot ID: O34528
• Organism: Bacillus subtilis strain GUCC48
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2806942..2818207

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QLH41_RS14915 (QLH41_14915)	yrrB	2808313..2808933 (-)	621	WP_010886584.1	tetratricopeptide repeat protein	-
QLH41_RS14920 (QLH41_14920)	mnmA	2809019..2810134 (-)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
QLH41_RS14925 (QLH41_14925)	iscSA	2810165..2811304 (-)	1140	WP_003246057.1	cysteine desulfurase family protein	-
QLH41_RS14930 (QLH41_14930)	cymR	2811323..2811739 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
QLH41_RS14935 (QLH41_14935)	rarA	2811942..2813207 (+)	1266	WP_004398500.1	replication-associated recombination protein A	Machinery gene
QLH41_RS14940 (QLH41_14940)	tcdA	2813249..2814013 (-)	765	WP_009967893.1	tRNA threonylcarbamoyladenosine dehydratase	-
QLH41_RS14950 (QLH41_14950)	aspS	2814349..2816127 (-)	1779	WP_003229758.1	aspartate--tRNA ligase	-
QLH41_RS14955 (QLH41_14955)	hisS	2816141..2817415 (-)	1275	WP_003229755.1	histidine--tRNA ligase	-
QLH41_RS14960 (QLH41_14960)	yrzK	2817797..2817967 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46514.38 Da
• Isoelectric Point: 7.2043

>NTDB_id=763403 QLH41_RS14935 WP_004398500.1 2811942..2813207(+) (rarA) [Bacillus subtilis strain GUCC48]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPELIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=763403 QLH41_RS14935 WP_004398500.1 2811942..2813207(+) (rarA) [Bacillus subtilis strain GUCC48]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGAATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGAACTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCAATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAGGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACTGGAAAGTTCGAATCTGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

3D structure

• AlphaFold DB: O34528

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	100	100	1