Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   OPT59_RS09565 Genome accession   NZ_CP125360
Coordinates   1921285..1923621 (-) Length   778 a.a.
NCBI ID   WP_015017393.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. equisimilis strain UT_120444     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1916285..1928621
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OPT59_RS09545 (OPT59_09545) rpsF 1916412..1916702 (-) 291 WP_002983117.1 30S ribosomal protein S6 -
  OPT59_RS11300 - 1917661..1917954 (-) 294 WP_014612572.1 hypothetical protein -
  OPT59_RS09550 (OPT59_09550) mutY 1918119..1919285 (+) 1167 WP_042357990.1 A/G-specific adenine glycosylase -
  OPT59_RS09555 (OPT59_09555) trxA 1919336..1919650 (-) 315 WP_003052691.1 thioredoxin -
  OPT59_RS09560 (OPT59_09560) - 1919873..1921192 (+) 1320 Protein_1824 FAD-containing oxidoreductase -
  OPT59_RS09565 (OPT59_09565) mutS/mutS2 1921285..1923621 (-) 2337 WP_015017393.1 endonuclease MutS2 Machinery gene
  OPT59_RS09570 (OPT59_09570) - 1923777..1924322 (-) 546 WP_003061010.1 CvpA family protein -
  OPT59_RS09575 (OPT59_09575) - 1924325..1924633 (-) 309 WP_003052702.1 hypothetical protein -
  OPT59_RS09580 (OPT59_09580) rnhC 1924790..1925689 (+) 900 WP_042357991.1 ribonuclease HIII -
  OPT59_RS09585 (OPT59_09585) lepB 1925711..1926304 (+) 594 WP_012767541.1 signal peptidase I -

Sequence

Protein


Download         Length: 778 a.a.        Molecular weight: 87091.64 Da        Isoelectric Point: 6.7696

>NTDB_id=762535 OPT59_RS09565 WP_015017393.1 1921285..1923621(-) (mutS/mutS2) [Streptococcus dysgalactiae subsp. equisimilis strain UT_120444]
MDKKILEQLEFDKVKEQFRAYLQTEQGNRELDQLEPLNHHDKIKHYFLEIEEMAGIFVEQHHFALGSLSDISASMRRLEL
EADLSIPELLAVKKILQVSAEASRFYVDLENVQLQALKRLFENLELFPSLQGSLQAINDGGFVESFASPELEKIRRSISD
KEHASRNVLQDLLKKQGDYLSESLIASRNGRSVLPVKNTFRNKVAGVVHDISASGNTVYIEPRALVQLNEELTQLQADER
HEVSRVLQALSDLIRPHSRALTNNAWILGHLDFIRAKYLYMRDNKATVPAISDDKSLQLLNVRHPLLQEPVANDLHFSKD
LAVIVITGPNTGGKTIMLKTLGLAQLMAQSGLPILADKGSKVAVFSGIFADIGDEQSIEQSLSTFSSHMTHIVAILNQAD
ADSLVLFDELGAGTDPQEGASLAMAILEQLRLTNIKTMATTHYPELKAYGIETPYVENASMEFDSMSLKPTYRFMQGVPG
RSNAFEIARRLGLAEHIVKEAQNMTDTDSDVNRIIEQLEKQTLESRKRLDYIREVEQDNLKFNRAVKKLYNEFSQAKDKE
IEKATLEAREIVDLALAESDSILNQLHDKAALKPHEVIEAKGQLKQLVPEKSLSQNKVLKKAKQLRAPRVGDDIIVTAYG
QRGTLVKELKDKKWEAQVGLIKMTLKEDEFSLVKVVEESQKPKKKAINVVKKAATGGGPRARLDLRGKRYEEAMQELDAF
IDQALLNNMSQVDIIHGIGTGVIREAVTKYLRRNKHVKSFGYAPQNAGGSGCTIANLG

Nucleotide


Download         Length: 2337 bp        

>NTDB_id=762535 OPT59_RS09565 WP_015017393.1 1921285..1923621(-) (mutS/mutS2) [Streptococcus dysgalactiae subsp. equisimilis strain UT_120444]
ATGGATAAAAAGATTTTAGAACAGTTAGAATTTGATAAGGTCAAAGAACAATTTCGGGCCTACCTGCAGACAGAGCAGGG
GAACCGTGAATTAGACCAACTTGAACCCCTCAATCATCATGACAAAATCAAACATTACTTTTTAGAAATTGAAGAGATGG
CTGGCATTTTTGTAGAGCAACATCACTTTGCATTGGGCAGTCTGTCTGACATTTCAGCTAGCATGAGACGTTTGGAACTG
GAAGCTGATTTGAGCATTCCCGAATTATTAGCAGTCAAAAAAATACTTCAGGTATCAGCAGAAGCGAGTCGCTTTTATGT
TGATTTGGAAAACGTTCAGCTGCAAGCCTTGAAGCGTTTGTTTGAAAATCTGGAGCTTTTTCCTAGCCTTCAAGGCAGTC
TTCAGGCTATTAATGACGGTGGTTTTGTGGAAAGTTTTGCCAGTCCCGAGTTAGAAAAAATTCGTCGTAGCATCTCAGAC
AAAGAACATGCGAGCCGGAATGTCTTACAAGATTTACTCAAAAAGCAAGGTGACTATTTGTCAGAAAGCTTGATTGCTAG
CCGAAACGGGCGTAGTGTCTTACCTGTCAAAAACACTTTCCGTAATAAGGTGGCAGGGGTCGTTCACGATATTTCGGCTT
CAGGAAATACGGTTTATATTGAACCACGAGCTCTTGTTCAACTAAATGAAGAGCTGACGCAGTTACAAGCCGACGAACGC
CATGAAGTGTCACGTGTCCTTCAAGCCTTATCTGACCTCATCAGACCTCATAGTCGAGCTCTTACCAATAATGCTTGGAT
TCTGGGGCATCTGGATTTTATCAGAGCCAAATACCTCTATATGAGAGACAATAAGGCCACGGTCCCGGCTATTTCGGATG
ATAAAAGTTTACAGTTGTTAAATGTGCGCCACCCTCTTTTGCAGGAGCCAGTTGCTAATGATTTGCATTTCTCTAAAGAT
TTGGCTGTTATTGTGATTACTGGTCCGAATACTGGTGGTAAAACCATCATGCTAAAAACACTTGGTTTAGCCCAGCTAAT
GGCCCAATCAGGTCTGCCTATTCTAGCAGATAAAGGTTCCAAAGTTGCTGTTTTTAGTGGTATTTTTGCTGATATTGGCG
ATGAACAATCCATTGAGCAGAGCTTATCAACTTTCTCTAGCCATATGACTCATATTGTTGCTATTTTGAATCAAGCTGAT
GCAGACAGTTTAGTACTCTTTGATGAGCTAGGGGCAGGAACAGATCCGCAAGAAGGAGCAAGTCTTGCTATGGCAATCTT
GGAGCAGTTACGCTTAACTAATATCAAAACCATGGCGACTACCCATTACCCTGAACTAAAAGCATATGGCATCGAAACTC
CCTATGTGGAAAATGCCAGTATGGAGTTCGATAGCATGAGTTTAAAACCAACTTACCGCTTTATGCAGGGAGTTCCAGGT
CGTTCAAATGCCTTTGAAATTGCTAGACGCCTTGGGTTGGCAGAGCACATTGTCAAAGAAGCTCAAAACATGACAGACAC
AGATAGTGATGTTAACCGTATTATCGAACAGTTGGAGAAACAAACTCTGGAGAGTCGTAAGCGGCTTGATTATATTCGAG
AAGTGGAGCAAGATAACCTCAAATTTAACCGTGCGGTCAAAAAATTGTACAATGAGTTCTCACAGGCCAAAGATAAGGAA
ATTGAAAAAGCTACCCTTGAAGCGCGTGAGATCGTAGACTTAGCTTTAGCAGAAAGTGACAGTATTTTAAACCAGTTGCA
TGACAAAGCTGCACTTAAACCTCACGAAGTTATTGAAGCCAAGGGGCAACTCAAACAGTTAGTGCCAGAAAAGAGTCTTT
CTCAAAACAAGGTCCTAAAGAAAGCGAAGCAATTACGAGCTCCTCGAGTAGGAGACGATATTATTGTAACAGCCTATGGC
CAAAGAGGAACCTTGGTAAAAGAACTCAAAGATAAGAAGTGGGAAGCGCAAGTTGGGCTGATCAAGATGACCCTCAAAGA
AGATGAATTTAGTCTTGTGAAGGTTGTTGAGGAATCTCAAAAACCAAAGAAAAAAGCCATCAACGTGGTCAAGAAGGCTG
CTACTGGTGGTGGTCCTCGTGCCCGTCTGGATTTGCGTGGAAAACGGTATGAAGAAGCGATGCAAGAACTAGACGCCTTT
ATTGACCAAGCTCTCTTAAATAATATGAGCCAAGTGGATATTATTCATGGGATTGGCACTGGTGTAATCCGTGAAGCTGT
TACCAAATACCTCAGACGAAACAAACATGTTAAAAGCTTTGGTTATGCTCCACAGAATGCGGGTGGATCAGGGTGTACCA
TTGCGAACTTAGGTTGA

Domains

Predicted by InterProScan.

Smr domain (Smr)

(703-776)

MutS2 and Smr-associated SH3 domain (MSSS)

(630-669)

MutS domain V (MutS_V)

(324-505)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

40.304

100

0.409