Detailed information NTG0762279

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: QL281_RS14210
• Genome accession: NZ_CP125292
• Coordinates: 2619689..2620810 (+)
• Length: 373 a.a.
• NCBI ID: WP_069837225.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM117797
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2614689..2625810

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QL281_RS14185 (QL281_14185)	ycdA	2614693..2615712 (-)	1020	WP_049832648.1	DUF4352 domain-containing protein	-
QL281_RS14190 (QL281_14190)	-	2615781..2615912 (-)	132	WP_003246334.1	hypothetical protein	-
QL281_RS14195 (QL281_14195)	ycdB	2616086..2617507 (+)	1422	WP_242304511.1	YcdB/YcdC domain-containing protein	-
QL281_RS14200 (QL281_14200)	ycdC	2617694..2619055 (+)	1362	WP_242304594.1	YcdB/YcdC domain-containing protein	-
QL281_RS14205 (QL281_14205)	cwlK	2619063..2619566 (-)	504	WP_017695036.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
QL281_RS14210 (QL281_14210)	rapF	2619689..2620810 (+)	1122	WP_069837225.1	response regulator aspartate phosphatase RapJ	Regulator
QL281_RS14215 (QL281_14215)	ycdF	2620918..2621694 (+)	777	WP_014478742.1	SDR family oxidoreductase	-
QL281_RS14220 (QL281_14220)	ycdG	2621718..2623403 (+)	1686	WP_095843458.1	alpha-glucosidase	-
QL281_RS14225 (QL281_14225)	znuA	2623591..2624550 (+)	960	WP_029317219.1	metal ABC transporter substrate-binding protein	-
QL281_RS14230 (QL281_14230)	znuC	2624605..2625300 (+)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44354.20 Da
• Isoelectric Point: 4.8344

>NTDB_id=762279 QL281_RS14210 WP_069837225.1 2619689..2620810(+) (rapF) [Bacillus subtilis strain SRCM117797]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAAEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLLNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=762279 QL281_RS14210 WP_069837225.1 2619689..2620810(+) (rapF) [Bacillus subtilis strain SRCM117797]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATACGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTACTGGAATACTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATCGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAGCTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCGTACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGACTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGCAGAGGCGTATGATCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAACTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCCGACGCCGAAGATCTGTTGCATGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGCTGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (219-287)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405