Detailed information NTG0762227

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: QL281_RS04350
• Genome accession: NZ_CP125292
• Coordinates: 766522..767787 (+)
• Length: 421 a.a.
• NCBI ID: WP_041336160.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM117797
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 761522..772787

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QL281_RS04330 (QL281_04330)	yrrB	762893..763513 (-)	621	WP_206697897.1	tetratricopeptide repeat protein	-
QL281_RS04335 (QL281_04335)	mnmA	763599..764714 (-)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
QL281_RS04340 (QL281_04340)	iscSA	764742..765884 (-)	1143	WP_003229769.1	cysteine desulfurase family protein	-
QL281_RS04345 (QL281_04345)	cymR	765903..766319 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
QL281_RS04350 (QL281_04350)	rarA	766522..767787 (+)	1266	WP_041336160.1	replication-associated recombination protein A	Machinery gene
QL281_RS04355 (QL281_04355)	-	767922..769274 (-)	1353	WP_129093204.1	IS1182 family transposase	-
QL281_RS04360 (QL281_04360)	tcdA	769407..770171 (-)	765	WP_003229763.1	tRNA threonylcarbamoyladenosine dehydratase	-
QL281_RS04370 (QL281_04370)	aspS	770507..772285 (-)	1779	WP_015384241.1	aspartate--tRNA ligase	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46526.39 Da
• Isoelectric Point: 7.1741

>NTDB_id=762227 QL281_RS04350 WP_041336160.1 766522..767787(+) (rarA) [Bacillus subtilis strain SRCM117797]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKYLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=762227 QL281_RS04350 WP_041336160.1 766522..767787(+) (rarA) [Bacillus subtilis strain SRCM117797]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAATATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGAATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GTCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCTGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

• AAA C-terminal domain (AAA_assoc_2) (172-251)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.525	100	0.995