Detailed information NTG0760058

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: OSV62_RS11055
• Genome accession: NZ_CP113080
• Coordinates: 2238830..2239531 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594579.1
• Uniprot ID: A0A0D5YJA0
• Organism: Acinetobacter baumannii strain AB5075-T
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2233830..2244531

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OSV62_RS11025 (OSV62_11025)	-	2234137..2234580 (-)	444	WP_001246675.1	SRPBCC family protein	-
OSV62_RS11030 (OSV62_11030)	tadA	2234650..2235153 (-)	504	WP_001997771.1	tRNA adenosine(34) deaminase TadA	-
OSV62_RS11035 (OSV62_11035)	-	2235160..2236284 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
OSV62_RS11040 (OSV62_11040)	ung	2236281..2236994 (-)	714	WP_001177527.1	uracil-DNA glycosylase	-
OSV62_RS11045 (OSV62_11045)	-	2237045..2237641 (-)	597	WP_000908449.1	6-pyruvoyl trahydropterin synthase family protein	-
OSV62_RS11050 (OSV62_11050)	gspK	2237871..2238830 (-)	960	WP_000301478.1	type II secretion system minor pseudopilin GspK	-
OSV62_RS11055 (OSV62_11055)	xcpW	2238830..2239531 (-)	702	WP_000594579.1	type II secretion system minor pseudopilin GspJ	Machinery gene
OSV62_RS11060 (OSV62_11060)	xcpV	2239531..2239911 (-)	381	WP_000836914.1	type II secretion system minor pseudopilin GspI	Machinery gene
OSV62_RS11065 (OSV62_11065)	-	2239901..2240455 (-)	555	WP_000841373.1	type II secretion system protein	-
OSV62_RS11070 (OSV62_11070)	-	2240465..2241073 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
OSV62_RS11075 (OSV62_11075)	-	2241111..2241884 (-)	774	WP_000497300.1	TatD family hydrolase	-
OSV62_RS11080 (OSV62_11080)	-	2241902..2242243 (-)	342	WP_001183027.1	PilZ domain-containing protein	-
OSV62_RS11085 (OSV62_11085)	-	2242255..2243235 (-)	981	WP_001075416.1	DNA polymerase III subunit delta'	-
OSV62_RS11090 (OSV62_11090)	kdsB	2243247..2244008 (-)	762	WP_000680692.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26707.66 Da
• Isoelectric Point: 9.5501

>NTDB_id=760058 OSV62_RS11055 WP_000594579.1 2238830..2239531(-) (xcpW) [Acinetobacter baumannii strain AB5075-T]
MIKNKYIHIRSFSSRLAARSSSARLTRVSGFTLVELLVAIAIFAVLSLLGWKIFDYLFKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=760058 OSV62_RS11055 WP_000594579.1 2238830..2239531(-) (xcpW) [Acinetobacter baumannii strain AB5075-T]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTTCTTCTCGTCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGTCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGTTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCGGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

3D structure

• AlphaFold DB: A0A0D5YJA0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	98.283	100	0.983