Detailed information NTG0759921

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: OSH15_RS11230
• Genome accession: NZ_CP113074
• Coordinates: 2312401..2313102 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594584.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain ATCC17978 TnAraC-H0N27_12600
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2307401..2318102

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OSH15_RS11200 (OSH15_11205)	-	2307708..2308151 (-)	444	WP_001246675.1	SRPBCC family protein	-
OSH15_RS11205 (OSH15_11210)	tadA	2308221..2308724 (-)	504	WP_000033177.1	tRNA adenosine(34) deaminase TadA	-
OSH15_RS11210 (OSH15_11215)	-	2308731..2309855 (-)	1125	WP_000982062.1	enoyl-CoA hydratase/isomerase family protein	-
OSH15_RS11215 (OSH15_11220)	ung	2309852..2310565 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
OSH15_RS11220 (OSH15_11225)	-	2310616..2311212 (-)	597	WP_000908453.1	6-carboxytetrahydropterin synthase	-
OSH15_RS11225 (OSH15_11230)	gspK	2311442..2312401 (-)	960	WP_000301478.1	type II secretion system minor pseudopilin GspK	-
OSH15_RS11230 (OSH15_11235)	xcpW	2312401..2313102 (-)	702	WP_000594584.1	type II secretion system minor pseudopilin GspJ	Machinery gene
OSH15_RS11235 (OSH15_11240)	xcpV	2313102..2313482 (-)	381	WP_000836915.1	type II secretion system minor pseudopilin GspI	Machinery gene
OSH15_RS11240 (OSH15_11245)	-	2313472..2314026 (-)	555	WP_000841375.1	type II secretion system protein	-
OSH15_RS11245 (OSH15_11250)	-	2314036..2314644 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
OSH15_RS11250 (OSH15_11255)	-	2314682..2315455 (-)	774	WP_000497298.1	TatD family hydrolase	-
OSH15_RS11255 (OSH15_11260)	-	2315473..2315814 (-)	342	WP_001183025.1	PilZ domain-containing protein	-
OSH15_RS11260 (OSH15_11265)	-	2315826..2316806 (-)	981	WP_001075412.1	DNA polymerase III subunit delta'	-
OSH15_RS11265 (OSH15_11270)	kdsB	2316818..2317579 (-)	762	WP_000680696.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26622.59 Da
• Isoelectric Point: 9.5501

>NTDB_id=759921 OSH15_RS11230 WP_000594584.1 2312401..2313102(-) (xcpW) [Acinetobacter baumannii strain ATCC17978 TnAraC-H0N27_12600]
MIKNKYIHIRSIASRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLNQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=759921 OSH15_RS11230 WP_000594584.1 2312401..2313102(-) (xcpW) [Acinetobacter baumannii strain ATCC17978 TnAraC-H0N27_12600]
ATGATAAAAAATAAATATATTCATATCCGAAGCATTGCTTCTCGTCTTGCGGCGCGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAGTTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAATCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996